Ectopseudomonas alcaliphila: UYA_16025
Help
Entry
UYA_16025 CDS
T06680
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
pall
Ectopseudomonas alcaliphila
Brite
KEGG Orthology (KO) [BR:
pall00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pall03016
]
UYA_16025
Enzymes [BR:
pall01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
UYA_16025
Transfer RNA biogenesis [BR:
pall03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
UYA_16025
Prokaryotic type
UYA_16025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
APU31148
LinkDB
All DBs
Position
complement(3495917..3496975)
Genome browser
AA seq
352 aa
AA seq
DB search
MNELQLLGPRAHGEACGRAVLKATAEDFQVDEVLDIPLTGQGEHLWLWVEKRGLNTEEAA
RRIARAAGLPLKAVSYAGLKDRQALTRQWFSLHLPGKADPDLAAAQGDDLVILRSQRHNR
KLQRGAHAANGFTLRLTALEADRDALEQRLQRIAAQGVPNYFGLQRFGFDGGNVEQARDF
AARLELPVQRNLRSRLLSSARSYLFNQVLAKRVAAGTWNQAQIGDLLAFTASRSFFMAGE
AECIDPRLAILDLHPTGPLWGDGPLPTAGETRQLEQEVADEAAQLVQWLIKADMAHERRI
LRLPIGGLSWHYPGPDILQLAFVLPAGCFATVVVRELLDLVPAGQTDTPCEF
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgaacgagttgcaactgctcgggccgcgcgcccacggcgaggcctgtgggcgcgcggtg
ctcaaggccacggccgaggacttccaggtcgatgaggtgctcgacatcccgctcactggc
cagggtgagcacctctggctatgggtggaaaagcgtggcttgaataccgaggaggccgct
cggcgtatcgcccgcgctgccggcctgccgctcaaggcggtcagttacgcgggactcaag
gatcgtcaggcactgacccgccagtggttcagcctgcacctgccgggcaaggccgatccc
gatctggcggccgcgcagggtgatgatctggtcatcctgcgcagccagcggcacaaccgc
aaattgcagcgtggcgcccatgccgccaatggtttcaccttgcgcctgacagccctcgaa
gcggatcgcgatgcgctggagcagcgtctgcagcgtatcgccgcgcaaggcgtgcccaat
tacttcggcttgcagcgttttggcttcgatggcggcaatgtcgagcaggcccgcgatttt
gccgcgcgcctggagctgccggtgcagcgcaacctgcgttcgcgtctactttcctcggcg
cgcagctacctgttcaatcaagtgttggccaagcgcgtggctgctggcacctggaaccag
gcgcagatcggtgacttgctggccttcactgccagccgcagtttcttcatggccggtgag
gccgagtgcattgacccgcgcctggccattcttgacctgcatccgaccgggccgctgtgg
ggcgacgggcctttgccgaccgctggtgagacccgacagctggagcaggaagtagccgat
gaggctgcgcaactggtgcaatggctgatcaaggcggacatggcgcacgaacggcgaatt
ctgcgcctccccatcggcggcctgtcatggcattatcccggacccgatattctgcaactt
gcattcgtcctgccggccgggtgtttcgccaccgtggtggtgcgcgaattgctcgatctg
gtgccagcagggcagacggatactccatgcgaattctga
DBGET
integrated database retrieval system
