Ectopseudomonas alcaliphila: UYA_16090
Help
Entry
UYA_16090 CDS
T06680
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pall
Ectopseudomonas alcaliphila
Pathway
pall03030
DNA replication
pall03430
Mismatch repair
pall03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pall00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
UYA_16090
03430 Mismatch repair
UYA_16090
03440 Homologous recombination
UYA_16090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pall03032
]
UYA_16090
03400 DNA repair and recombination proteins [BR:
pall03400
]
UYA_16090
Enzymes [BR:
pall01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
UYA_16090
DNA replication proteins [BR:
pall03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
UYA_16090
DNA repair and recombination proteins [BR:
pall03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
UYA_16090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
tRNA_anti_2
HHH_3
HROB
Motif
Other DBs
NCBI-ProteinID:
APU31161
LinkDB
All DBs
Position
complement(3509361..3512891)
Genome browser
AA seq
1176 aa
AA seq
DB search
MTQAFVHLRLHTEYSLVDGLVRVKPLIKAVAGAGMPAVAVTDMSNMCSLVKFYKAAMGAG
IKPICGADIWMASAEEDGPLTRLTLLAMNAKGYRNLTELISRGWAEGQSNDLVIIQRDWV
KGAAEGLIALSGAREGEVGQALLAGDEALAEVRLREWMAVFPDRFYLEVQRTSRVGDEEY
LHAAVALADRVEAPLVATNDVRFIKQGDFEAHETRVCIGEGRTLDDPRRPRHYSDQQYLK
SAEEMWELFSDLPEALENTVEIAKRCNIDVQLGKYFLPDFPTPNGMGIDDYLRHASFEGL
EERLQVLLPKDTPDYEAKRQVYIDRLNFELDIIIQMGFPGYFLIVMDFIKWAKNNGVPVG
PGRGSGAGSLVAYVLKITDLDPLAYDLLFERFLNPERVSMPDFDVDFCMDGRDRVIDYVA
EKYGRNAVSQIITFGSMAAKAVVRDVARAQGKSYGLADRLSKMIPFEVGMTLEKAYEMEE
PLREFLKNDEEAQEIWDMSLKLEGVVRGTGKHAGGVVIAPTKLTDFSPIACDEEGGGLVT
QFDKDDVEQAGLVKFDFLGLRTLTIIKWALETVHRIQKRDGAPDEDLVNIDFIPLDDKKT
YDMLQKAETTAVFQLESRGMKELIKKLKPDCLEDMIALVALFRPGPLQSGMVDDFINRKH
GRAELSYPHPDYQYAGLEPVLKPTYGIILYQEQVMQIAQVMGGYTLGQADMLRRAMGKKK
PEEMAKQRGGFIEGCASNGIDANLAGNIFDLVEKFAGYGFNKSHSAAYGLVSYQTAWLKA
HYPAPFMAAVLSADMHNTDKVVILVEECRNMKLRIEPPDVNVSEFKFTVNDDGRIVYGLG
AVKGVGEGPVEAIVECRAEGGPFKDLFDFCNRVDLKRINKRTLEALIRSGALDRLGPYYQ
DELKAYQASVDKNRAVLLASMEEAVQSAEQTARSAESGHMDLFGGLFAEPEADVYANHRK
ARELPIKERLKGEKDTLGIYLSGHPIDEYEGEIRRFARQRIVELKPARDTQTIAGMIVNL
RVMKNKKGDKMGFITLDDRSGRIEASLFADAFASNQALLQNDALVVVEGEVSNDDFSGGL
RLRAKRVMSLEEARTGLADSLRVKVASEALKGDRLRWLAELCSKHKGACPVTLDYSGEEA
RALLQFGDAWRIDPADTLIQALRDQFGRDNVFLHYR
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atgacccaagctttcgtccacctgcgtctgcacaccgaatactccctggtcgatggcctg
gtgcgggtcaaaccgctgatcaaggccgtggccggggccggcatgccggcggttgcggtc
accgacatgagcaacatgtgctcgctggtgaagttctacaaggcggccatgggcgccggg
atcaagccgatctgtggtgccgatatctggatggccagcgccgaggaagacggcccgctg
acgcgcctgaccctgctggcgatgaacgccaagggctaccgcaacctcaccgaactgatc
tctcgtggctgggccgaagggcagagcaacgacctggtgatcattcagcgtgactgggtc
aagggcgccgccgagggcctcatcgcgctatccggcgcgcgtgaaggcgaagtcggccag
gcgctgctggccggtgacgaagcgctggccgaagtgcgcctgcgtgaatggatggcagtg
ttcccggatcgcttctacctggaagtgcaacgcaccagccgcgtcggtgacgaggaatac
ctgcacgccgccgtggccctggccgaccgcgtcgaggcgccgctggtggcgaccaacgac
gtgcgcttcatcaagcagggtgatttcgaggcgcacgaaacccgcgtctgtatcggtgaa
ggtcgtaccctggacgacccgcgccggccgcggcattactccgatcagcagtacctgaaa
agcgccgaggaaatgtgggagctgttctccgacctgcccgaggcactggagaacaccgtc
gagatcgccaagcgctgcaatatcgatgtgcagctcggcaaatactttctgccggatttc
cccacgcccaatggcatgggcatcgacgactacctgcgccacgcctccttcgaggggctg
gaagagcgtctccaggtattgctgcccaaggatacgccggattacgaggccaagaggcag
gtctatatcgaccgcctcaacttcgaactcgatatcatcattcagatgggtttccccggt
tacttcctgatcgtgatggacttcatcaagtgggccaagaacaacggtgtgccggtcggc
ccgggccgtggttcgggtgccggttcgctggtggcctacgtgctgaagatcactgacctc
gatccgctggcctatgacctgctgttcgaacgattcctcaaccccgagcgggtttccatg
cccgacttcgacgtcgacttctgcatggacggccgcgaccgggtgatcgactacgtggct
gagaaatacgggcgcaacgcggtgagccagatcatcaccttcggctcgatggcggccaag
gcggtggtgcgcgacgtcgcccgggcgcagggtaagtcctacggtctggccgaccgtctg
tcgaagatgatccccttcgaagtgggcatgaccctggagaaagcctacgagatggaggag
ccgctacgcgagttcctcaagaacgacgaggaagcccaggaaatctgggacatgtcgctc
aagctcgaaggcgtggtgcgcggtaccggcaagcacgctggtggtgtggtgatcgcgccg
accaagctcaccgacttctcgccgatcgcctgtgacgaggagggcggtggcctggtgacc
cagttcgacaaggacgacgtcgagcaggctggcctggtcaagttcgacttcctcggtctg
cgtaccctgaccatcatcaagtgggcgttggaaaccgtccaccgcatccagaagcgcgac
ggtgcgccggatgaagatctggtcaacatcgacttcatcccgctggatgacaagaaaacc
tacgacatgctgcagaaggcggagaccaccgcggtcttccagcttgaatcgcgtggcatg
aaggagctgatcaagaagctcaagcccgactgcctggaagacatgatcgcactggtggcg
ctgttccgcccgggcccgctgcagtccggcatggtggacgacttcatcaatcgtaagcac
ggccgcgccgagctgtcctacccgcacccggattaccagtacgccggcctcgagccggtg
ctcaagcccacctacggcatcatcctgtatcaggagcaggtgatgcagatcgcccaggtc
atgggtggctacaccctggggcaggcggacatgctgcggcgtgccatgggtaagaagaag
cccgaggaaatggccaagcagcgcggcggcttcatcgaaggttgtgccagcaacggcatc
gacgccaatctggcgggtaacatcttcgatctggtggaaaagttcgccggttacggtttc
aacaaatcgcactcggccgcttacggcctggtctcctaccagactgcctggctcaaggcg
cattacccggcgccgttcatggcggccgtgctctcggcggatatgcacaacaccgacaag
gtggtgatcctggtggaagagtgccgcaacatgaagttgcgcatcgaaccgccagacgtg
aacgtgtccgagttcaagttcaccgtcaacgacgacggccgtatcgtctacggcctgggt
gcggtcaagggcgtcggcgaggggccggtcgaggccatcgtcgaatgccgcgccgaaggt
ggtccgttcaaggatctgttcgacttctgcaatcgcgtcgacctcaagcgcatcaacaag
cgcaccctggaagcgttgatccgcagcggcgcgctggatcgtcttggtccgtactatcag
gacgagctcaaagcctaccaggccagtgtcgacaagaaccgcgcggtgctgctggcgtcc
atggaagaggccgtgcagtccgccgagcagactgcgcgcagcgccgagagcggccatatg
gatctgttcggtggcctgttcgccgagcctgaggcggacgtctacgccaaccaccgcaag
gcccgcgagctgccgatcaaggagcgtctgaagggcgagaaggacaccctgggtatctac
ctgtccggccaccccatcgacgagtacgaaggcgagattcgccgtttcgcccgccagcgt
atcgtcgagctcaagccggcgcgcgatacccagaccatcgccgggatgatcgtcaacctg
cgggtgatgaagaacaagaaaggcgacaagatgggcttcatcaccctcgacgaccgctcc
ggacgcatcgaggcctcgctgttcgccgatgccttcgccagcaatcaggcgctgctgcag
aacgatgcgctggtggtggtcgagggtgaggtcagtaacgacgacttctccggtggcctg
cgtctgcgtgccaagcgcgtgatgagtctggaagaggcgcgcacggggcttgccgacagc
ctgcgggtgaaggtcgccagtgaggcattgaagggtgatcgcctgcgctggctggccgaa
ctgtgcagcaagcacaagggcgcctgcccggtgacgctggactacagtggcgaggaggca
cgcgccttgcttcaatttggcgacgcctggcgaatcgacccggccgacactttgattcag
gcattgcgtgaccagttcgggcgcgacaacgtctttttgcactaccgctga
DBGET
integrated database retrieval system
