Ectopseudomonas alcaliphila: UYA_17925
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Entry
UYA_17925 CDS
T06680
Name
(GenBank) lytic transglycosylase F
KO
K18691
peptidoglycan lytic transglycosylase F [EC:
4.2.2.29
]
Organism
pall
Ectopseudomonas alcaliphila
Brite
KEGG Orthology (KO) [BR:
pall00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pall01011
]
UYA_17925
Enzymes [BR:
pall01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
UYA_17925
Peptidoglycan biosynthesis and degradation proteins [BR:
pall01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
UYA_17925
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Gene cluster
GFIT
Motif
Pfam:
SLT
SBP_bac_3
Lysozyme_like
Motif
Other DBs
NCBI-ProteinID:
APU31513
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Position
3909527..3910993
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AA seq
488 aa
AA seq
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MFARPAIRMRCATGLLAIGTLLMLAGCGEDPKPSVLEQAKAEGELRVVTRNSPATYFQDR
NGATGFEYELAKRFATDLGLELKIETADNLDSLFSSLDLANGPVMAAAGLVDTPQRQRQA
RFSIPYLEVTPQVIYRQGETRPTKPEDLIGKRILVLAGSSHAEQLAALKLELPELEFEVS
DAVEVVDLLRMVDEGQIDLTLVDSNELAMNQVYFPNVRVAFDLGDTNTMRWAVAAGEDDS
LLVEIDAFLERSEANGTLQRLKERYYGHVDVLGYVGAYTFAQHLQQRLPRYEKMFRQAGH
ANQVDWRLLAAMGYQESLWQPNATSKTGVRGLMMLTQRTAQSVGVSNRLDPKQSIDGGAR
YFIQVHQQLPEGIVEPDRTWFALAAYNVGGGHLEDARKLTEAEGLDPNKWADVQKILPRL
AQKQWYSKTRYGYARGGEPVHFVRNIRRYYDILTWVTQPQLEGTQVAESGIHLPGIDKRK
PEEETPPL
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcacgacctgcgatacgcatgcgttgcgccacagggctgttggcgattggaacc
ctcctgatgcttgctggctgtggcgaagaccccaagcccagcgtactcgagcaggcaaag
gcggagggtgagctgcgcgtggtcactcgtaacagccccgccacctatttccaggaccgc
aacggcgccaccggtttcgaatatgaactggccaagcgcttcgccaccgatctcggcctg
gaacttaagatcgaaaccgcggacaacctcgatagtctgttttccagcctcgacctcgcc
aacggcccggtcatggccgccgccggcctggtggacacgccacagcgccagcgccaggcg
cgcttctcgattccctatctggaagtcacgccacaggtcatttatcgccagggcgaaacc
cgtccgaccaaacctgaagacctgatcggcaaacgcattctggtgctggccggcagcagc
catgccgaacagctggccgccctcaagctggaactgccggagctggagttcgaggtatcc
gacgccgtcgaggtggtcgacctgctgcgcatggtcgacgaagggcagatcgacctgacc
ctggtcgactccaacgagctggcgatgaaccaggtgtactttcccaacgtgcgagtcgcc
ttcgacctgggcgacaccaacaccatgcgctgggcggtagccgccggcgaggatgacagc
ctgctggtggagatagacgccttcctcgaacgctccgaggccaacggcaccctgcagcgc
ctgaaagaacgctactacggccatgtcgacgtgctcggctatgtcggtgcttacaccttc
gcccagcacctgcagcagcgcctgccgcgctacgagaaaatgttccgccaggccggtcac
gccaaccaggttgactggcgcctgctcgccgccatgggctatcaggagtcgctgtggcaa
cccaatgccacgtccaagactggcgtacgcggcctgatgatgctcactcagcgcactgcc
cagtcggtcggtgtctccaaccgcctcgaccccaaacagagcatcgacggcggtgcccgt
tacttcatccaggttcaccagcaactgccggaaggcatcgtcgagccggatcgcacctgg
ttcgccctggccgcctacaacgtcggcggcggccacctggaagatgcgcgcaagctgacc
gaagccgaagggctggacccgaacaagtgggccgatgtgcagaagatcctgccgcgcctg
gcgcaaaagcagtggtacagcaagacccgctacggctatgcccgcggcggcgagccggtg
cacttcgtgcgcaacatccgtcgttactacgacattctcacctgggtaacccagccgcag
ctggaaggcacgcaagtggccgagagtggtatccacctgcccggcatcgacaagcgcaag
cccgaagaagaaaccccgccgctctga
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