Pseudomonas alcaliphila: UYA_18250
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Entry
UYA_18250 CDS
T06680
Name
(GenBank) chromosome segregation protein SMC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
pall
Pseudomonas alcaliphila
Brite
KEGG Orthology (KO) [BR:
pall00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pall03400
]
UYA_18250
DNA repair and recombination proteins [BR:
pall03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
UYA_18250
Archaeal homologous recombinant proteins
UYA_18250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
AAA_21
cobW
AAA_15
nSTAND3
TsaE
RsgA_GTPase
AAA
NTPase_1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
APU31571
UniProt:
A0A1L7G3K9
LinkDB
All DBs
Position
complement(3983462..3986896)
Genome browser
AA seq
1144 aa
AA seq
DB search
MKILSLRLKNLNSLKGEWKIDFAAEPFAGSGLFAITGPTGAGKTTLLDAICLALYHRTPR
MSTLSASGNELMTRHTADCLAEVEFEVKGQGYRAFWSQRRARDKVDGALQAPKVELARIA
DGEILTDKIREKESLTAELTGLDFERFTKSMLLAQGGFAAFLEANANQRAELLEELTGTE
IYGQISQQVYERTKAAEQALNMLKSRAQGMELLDEAQRAELQAEQQRLGLEESPLLARQQ
ALQAQRRWREALQQAEQQREQARLGLEQAQQARNEAAVELQRLAASEPAARLQPLYLAWQ
QAQQDRQQAQQVLDDLHQQQRHSTEREHRQLWLASRYAQQSLSLRHAELQRLAGQRETLH
VRMSAAPQRERLGELLGSWRVQFDQRGQLLKEQQALHARMAQEGEQLAALQRQRDQLGVQ
QADALKRLEDARASEVRQQSELQALLGEGDEAGLRQRWQQLQVQGRVLDRLEQLAQSREQ
MAAQIAELTPRLAQLQQQHSRKNDEITGLRERYKALKQQQADKEKLLEQEQRIQDLEAYR
AQLQPGEACPLCGSHEHPAVSQYQALNVSATRQALEQCRNELAQLESQGGTLRDELTRLV
TQIAQVQQQLEQASQQAAQQDAQWQQQLIEQALQISDGAALRELQRQHEQSLTHLQTRLA
SVETGQAQLVQARGAREVAERALADAQQRQALLARDEENLQARQAEQGQDLQRLQQALRH
HEQVLLSSLEGFAVELPSDAGLWLDEQEQAWRDWQQAQAQDQQLQEQQREAQRLLADAET
QAGHWQQRWQDQGALTLAEPEPSAQPQLALNEAANSLASAQRESDALRGRVQSQQTLLLQ
LQQRSSEAEQHWLTALTASPFSDLAAFLAALLEEGERERLAALQARVERALTEASTLLAA
ADAQLQQLSATQQTELALGELDEQLQVLQSELRALSQRQGELRAQLQADETRRSSQQALF
AEISVQESEQRLWQQLNGLIGSADGAKFRKFAQGLTLDHLIHLANRQLKRLHGRYQLARK
GSGELELEVCDTWQADVARDCRTLSGGESFLVSLALALALSDLVSHKTSIDSLFLDEGFG
TLDGETLEVALDALDNLNASGKTIGVISHVEAMKERIPVQLRVHKGVGLGYSRLDARFAV
KEGA
NT seq
3435 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcctcagcctgcgcctcaagaacctcaattccctcaagggcgagtggaagatc
gacttcgctgccgagcctttcgccggtagcggcctgttcgccatcaccgggccgaccggt
gcgggcaagaccaccttgctcgacgccatttgcctggcgctgtaccaccgcacgccgcgc
atgagcacgctgtcggccagtggcaacgagctgatgacgcggcataccgccgactgcctg
gccgaggtcgagttcgaggtcaaggggcagggctaccgcgccttctggagccagcgccgc
gcgcgcgacaaggtcgacggtgcgttgcaggcgcccaaggtcgagctggcacgtatcgcc
gatggcgaaatactcaccgacaagatccgcgagaaggaaagtctcaccgctgagctgacc
ggcctcgatttcgagcgcttcaccaagtccatgctgctggcccagggcggctttgcggcg
tttctcgaagccaatgccaaccagcgcgccgagctgctggaggagctgaccggcaccgag
atttacgggcagatctcgcagcaggtctacgagcgcaccaaggctgccgaacaggcactc
aatatgctgaaaagccgcgcccaaggcatggagttgctcgacgaagcgcagcgcgccgag
ctgcaggccgagcagcagcgtctgggcttggaggagtcgccgctgctggcccggcagcag
gctctgcaggcccagcgccgttggcgtgaggcgctgcagcaggccgagcagcaacgggag
caggcgcgacttggactggagcaggcccagcaggcccgtaacgaggcagccgttgaactg
cagcgcctggccgccagtgagccggcagctcgcttgcagccgttgtacctggcctggcag
caggcgcagcaggacaggcagcaggcacagcaagtgctggatgacctgcatcagcagcaa
cgccacagcaccgagcgcgagcaccggcagctctggctggccagccgctatgcccagcaa
agcctgagcctgcgtcacgcggagctgcagcgtctggccgggcagcgtgaaacgctgcat
gtacgaatgagcgctgcgccgcaacgggaacgcctgggcgagcttctgggtagttggcgt
gtgcagttcgatcagcgcgggcaactgctcaaggagcaacaggcactgcacgcacgcatg
gcgcaggaaggtgagcagctcgccgccttgcagcgtcagcgtgatcagctcggtgtgcag
caggccgacgcgctgaagcggctggaggatgcgcgcgccagcgaggtcaggcagcagagc
gagctgcaggccttgctgggcgagggcgacgaggccggactgcgccagcgttggcagcaa
ctgcaagtgcaagggcgcgtattggatcgtctggagcaactggcgcagagccgcgagcaa
atggctgcacagatcgccgagttgaccccgcgtctggctcagttgcagcaacagcactcc
cgcaagaacgatgaaatcaccggcctgcgcgagcgttacaaggcgctcaagcaacagcag
gccgacaaggaaaagctgctggagcaggagcagcgcattcaggatctggaagcctaccgc
gcccagctgcagccgggcgaagcctgcccgttgtgtggttcgcacgagcatccggcggtc
agtcagtaccaggcgctcaacgtctccgccacgcgccaggcgctggagcagtgccgcaac
gaactggcgcaactggaaagccagggcggcaccctgcgtgacgagctgacccggctggtc
acgcagatcgctcaggttcagcagcaactggagcaggcgagccagcaggccgctcagcag
gatgcgcagtggcagcagcaactgatcgagcaggccttgcagatatctgacggcgccgct
ttgcgcgaactgcagcgccagcacgagcagagcctgacgcatctgcaaacgcgactcgcc
tcggtcgagaccgggcaggcgcaactggtacaggcgcgtggtgcacgtgaagtggccgag
cgggcgttggctgatgcgcagcagcgccaggcgctactggcgcgtgatgaggagaacctg
caggcgcgacaagctgagcagggccaggacctgcagcgtttgcagcaggcgcttcggcat
cacgagcaagtgctgctgagcagtctcgagggttttgctgttgagttgccgtcggacgct
ggcctttggctggacgagcaggagcaggcctggcgcgactggcagcaggcccaggcgcag
gatcagcaactgcaggagcagcagcgcgaggcgcagcgcctgctcgccgacgccgagaca
caggccgggcactggcaacagcgctggcaggaccaaggtgcgctgacgctggctgaaccc
gagccatcggcacagccgcaactggcgttgaatgaggccgccaacagcctggccagtgcc
cagcgcgaaagcgatgcgttgcgcggccgcgtgcagagtcagcagaccttgttgctgcag
ctgcagcaacgctcgagcgaggccgagcagcactggctgacggcactgacggccagtcct
ttcagcgatcttgcggcgtttctcgccgcgctgctggaagagggcgagcgagagcgtctg
gcggctttgcaggcacgtgtggagcgcgccttgaccgaggcttcgacgctgttggctgcc
gccgacgcgcagctgcagcagctcagcgccacgcagcagaccgagttggcgcttggtgaa
ctggatgagcagttgcaggtactgcagagcgaattgcgtgcactgagccagcgccagggt
gagttgcgcgcgcagttgcaggccgacgagacgcggcgcagcagccagcaggcgctgttc
gccgaaatcagtgtgcaggagagtgagcagcgcctgtggcaacagctcaacggcctgatc
ggctcggccgacggcgccaagttccgcaagttcgcccagggcctgaccctcgatcatctg
atccatctggccaatcgccaactgaagcgtctgcacgggcgctaccagctggcgcgcaag
ggtagcggcgaactcgagctggaggtgtgcgacacctggcaggccgacgtagcgcgcgac
tgccgtacgctgtccggtggcgagagtttcctggtcagcctggcgctggccttggcgctg
tccgatctggtcagccacaagaccagtattgattcgctgtttctcgatgaaggcttcggt
acgctggacggcgaaacgctggaggtggccctggatgcgctggacaacctcaacgccagc
ggcaagaccatcggtgtgatcagccatgtcgaggcgatgaaggagcgtattcccgtgcag
ttgcgggtgcacaagggcgtcggcctgggctatagccgactcgacgcacgttttgcggtg
aaggaaggagcgtag
DBGET
integrated database retrieval system
