Ectopseudomonas alcaliphila: UYA_18775
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Entry
UYA_18775 CDS
T06680
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pall
Ectopseudomonas alcaliphila
Pathway
pall03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pall00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
UYA_18775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pall03019
]
UYA_18775
03016 Transfer RNA biogenesis [BR:
pall03016
]
UYA_18775
Enzymes [BR:
pall01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
UYA_18775
Messenger RNA biogenesis [BR:
pall03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
UYA_18775
Transfer RNA biogenesis [BR:
pall03016
]
Prokaryotic type
tRNA degradation factors
UYA_18775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
S1_RRP5
KH-I_KHDC4-BBP
OB_RRP5_4th
KH_2
S1_2
Motif
Other DBs
NCBI-ProteinID:
APU31665
LinkDB
All DBs
Position
complement(4103084..4105189)
Genome browser
AA seq
701 aa
AA seq
DB search
MNPVIKKFQFGQSTVTLETGRIARQASGAVLVTVDDDVSVLVAVTGAKTADPSKGFFPLS
VHYQEKTYAAGKIPGGFFKREARPSEKETLTSRLIDRPIRPLFPEGFQNEVQVICTVVST
SKKTDPDIAAMIGTSAALAISGIPFNGPIGAARVAFHPETGYLLNPNYEQLKASSLDMVV
AGTKDAVLMVESEAKELTEDQMLGAVLFAHEEFQVVIQAVAELAAEAGKPTWDWQPKPEN
TALLNAIRSEFGEAISQAYTITVKQDRYARLGELRDQVVAKFSGEEGQPTAGEVKEAFGE
IEYRTVRENIVNGKPRIDGRDTRTVRGLNIEVGVLDKTHGSALFTRGETQALVVATLGTA
RDAQLLDTLEGEKKDPFMLHYNFPPYSVGECGRMGATGRREIGHGRLARRGVAAMLPSAD
EFPYTIRVVSEITESNGSSSMASVCGASLALMDAGVPMKAPVAGIAMGLVLEGEKFAVLT
DILGDEDHLGDMDFKVAGTAKGVTALQMDIKIQGITEEIMEQALEQALEARLNILGQMNQ
VIAQSRSELSANAPTMIAMKIDQDKIRDVIGKGGATIRGICEETKASIDIEDDGSIKIFG
ETKEAAEAARQRVLGITAEAEIGKIYVGKVERIVDFGAFVNILPGKDGLVHISMLSDQRV
EKVTDVLQEGQEVKVLVLDVDNRGRIKLSIKDVAAAEASGV
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
gtgaacccggtaatcaagaaattccagttcggtcagtcgaccgttaccctcgagactggc
cgtatcgcccgtcaagcctccggcgccgtgctggtcaccgttgatgacgacgtcagcgtg
ctggtcgccgtaaccggcgccaagacggccgatccgagcaagggcttcttcccgctgtcc
gtgcactaccaggaaaagacctacgcagccggcaagatccccggcggtttcttcaagcgt
gaagcacgtccttccgagaaggaaaccctcacctcgcgtctgatcgaccgtccgatccgt
ccgctgttcccggaaggcttccagaacgaagtgcaggtcatctgcaccgtggtgtccacc
agcaagaagaccgacccggacatcgcggcgatgatcggcacctcggccgctctggccatc
tctggtatcccgttcaacggcccgatcggcgccgcacgcgtagctttccacccggaaacc
ggctacctgttgaacccgaactacgagcagctcaaggcttccagcctggacatggtcgtg
gccggcaccaaggacgccgtgctgatggtcgaatcggaagccaaagagctgaccgaagac
cagatgctgggcgccgtactgtttgcccatgaagaatttcaggtggtcatccaggctgtt
gccgagctggccgctgaagccggcaagccgacctgggactggcagccgaagccggaaaac
accgcgctgctgaatgccatccgtagcgagttcggcgaggcgatttcccaggcctacacc
atcaccgtcaagcaggaccgctacgcgcgtctgggcgagctgcgtgatcaggtcgtggcc
aagttctccggtgaagaaggtcagcctactgccggtgaagtcaaggaagcctttggcgag
atcgaataccgcaccgtgcgcgagaacatcgtcaacggcaaaccgcgtatcgatggtcgt
gacacccgcaccgtgcgtggcctgaacatcgaagtcggtgtactggacaagacccacggt
tcggcgctgttcacccgtggcgaaacccaggcgctggtcgtggctaccctcggtaccgcc
cgcgacgcacagctgctggacaccctcgaaggcgagaagaaagaccccttcatgctgcac
tacaacttcccgccgtactcggtcggtgagtgtggtcgcatgggcgccactggccgccgc
gaaatcggccacggccgtctcgcccgtcgtggcgttgccgctatgctgccgagcgctgac
gagttcccgtacaccatccgcgtggtatcggaaatcaccgagtccaacggttcttcctcc
atggcttcggtctgcggtgcttccctggccctgatggacgctggtgtgccgatgaaggcg
ccggttgccggtatcgccatgggtctggtgctggaaggtgagaagttcgccgtgctgacc
gacatcctcggcgacgaagatcacctgggcgacatggacttcaaggtagccggtaccgcc
aagggcgtcaccgcgctgcagatggacatcaagatccagggcatcaccgaagaaatcatg
gagcaggcgctggagcaggcgctggaagctcgcctgaacatcctcggccagatgaaccag
gttatcgcccaatcgcgcagcgagctgtcggccaacgcgccgaccatgattgcgatgaag
atcgaccaggacaagatccgcgacgtcatcggtaaaggcggcgcgaccatccgtggtatc
tgcgaagaaaccaaggcttcgatcgacatcgaagacgatggctcgatcaagatcttcggt
gaaaccaaagaagctgccgaagctgctcgtcagcgcgttctgggcattaccgcagaagcc
gagatcggcaagatctacgtcggcaaggtcgagcgcatcgtcgacttcggtgccttcgtc
aacatcctgccgggcaaggacggtctggtgcacatctccatgctgagcgatcagcgcgtg
gagaaggtcaccgacgtgctgcaggaaggccaggaagtgaaggtactggtgctggacgtg
gacaaccgcggccgtatcaagctgtcgatcaaggatgtagctgctgccgaggcctctggc
gtctaa
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