Ectopseudomonas alcaliphila: UYA_19250
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Entry
UYA_19250 CDS
T06680
Name
(GenBank) chaperonin GroL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pall
Ectopseudomonas alcaliphila
Pathway
pall03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pall00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
UYA_19250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pall03019
]
UYA_19250
03110 Chaperones and folding catalysts [BR:
pall03110
]
UYA_19250
03029 Mitochondrial biogenesis [BR:
pall03029
]
UYA_19250
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pall04147
]
UYA_19250
Enzymes [BR:
pall01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
UYA_19250
Messenger RNA biogenesis [BR:
pall03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
UYA_19250
Chaperones and folding catalysts [BR:
pall03110
]
Heat shock proteins
HSP60 / Chaperonin
UYA_19250
Mitochondrial biogenesis [BR:
pall03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
UYA_19250
Exosome [BR:
pall04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
UYA_19250
Exosomal proteins of other body fluids (saliva and urine)
UYA_19250
Exosomal proteins of breast cancer cells
UYA_19250
Exosomal proteins of colorectal cancer cells
UYA_19250
Exosomal proteins of bladder cancer cells
UYA_19250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
APU31756
LinkDB
All DBs
Position
4210480..4212126
Genome browser
AA seq
548 aa
AA seq
DB search
MAAKEVKFGDSARKKMLIGVNVLADAVKATLGPKGRNVVLAKSFGAPTITKDGVSVAKEI
ELKDAFENMGAQLVKDVASKANDAAGDGTTTATVLAQAIVNEGLKSVAAGMNPMDLKRGI
DKATIAIVAQLKELAKPCTDTKAIAQVGTISANSDSSIGDIIAEAMEKVGKEGVITVEEG
SGLENELSVVEGMQFDRGYLSPYFINKPDTMVAELEGPLLLLVDKKISNIRELLPVLEAV
AKAGRPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAILTGGTV
ISEEVGLSLESATLEHLGNAKRVVLNKDNTTIIDGAGAQADIEARVAQIRKQVEDTTSDY
DKEKLQERLAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALV
RALLAIDELKGDNEDQNVGIALLRRAVEAPLRQIVANAGGEPSVVVDKVKQGSGNFGFNA
ATDTYGDMIEMGILDPAKVTRSALQAAASIGGLMITTEAMVAEAADDKGPAMPDMGGMGG
MGGMGGMM
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggctgctaaagaagtcaagtttggcgattccgcccgcaagaaaatgctcattggcgtc
aacgtactggccgacgccgtcaaagccaccctcggcccgaaaggccgtaacgtggtgctg
gccaaatccttcggcgccccgaccatcaccaaagacggtgtgtcggttgccaaggaaatc
gaactgaaagacgccttcgaaaacatgggcgcccaactggtcaaggacgttgcgtccaag
gccaacgacgctgccggtgacggcaccaccaccgctaccgtactggctcaagccatcgtc
aacgaaggcctgaagtccgttgctgccggcatgaacccgatggatctgaagcgcggcatc
gacaaggccaccatcgccatcgtcgcccaactgaaagaactggccaagccgtgcaccgac
accaaggccatcgcccaggtcggcaccatctccgccaactccgacagctccatcggtgac
atcatcgccgaagccatggaaaaggtcggtaaagaaggcgtcatcaccgttgaagaaggc
tcgggcctggaaaacgaactgtccgtcgtagaaggcatgcagttcgaccgtggctacctg
tcgccgtacttcatcaacaagccggacaccatggttgccgagctggaaggcccgctgctg
ctgctggtcgacaagaagatcagcaacatccgcgaactgctgccggttctggaagccgtt
gccaaggctggtcgtccgctgctgatcgtggctgaagacgtcgaaggcgaagccctggct
accctggtcgtcaacaacatgcgcggcatcgtcaaagtcgcagccgtcaaggctccgggc
ttcggcgaccgccgcaaggccatgctgcaggacatcgcaatcctcaccggcggtaccgtg
atctccgaagaagttggcctgtccctggaaagcgccactctggagcacctgggtaacgcc
aagcgcgtcgtgctgaacaaggacaacaccaccatcatcgatggtgctggcgcccaagcc
gacatcgaagcccgcgtggcgcagatccgcaagcaggtcgaagacaccacctccgactac
gacaaagagaagctgcaagagcgtctggccaagctggccggcggtgttgccgtgatcaag
gttggcgctgccaccgaagtcgagatgaaagagaagaaagcccgcgttgaagacgccctg
cacgctacccgcgctgctgtggaagaaggcgtggtacctggcggtggcgtggccctggtg
cgcgctctgctggcaatcgacgagctgaaaggcgacaacgaagaccagaacgtcggtatc
gctctgctgcgtcgcgctgtcgaagcgccgctgcgtcagatcgttgccaacgccggcggc
gagccgagcgtagtggtcgacaaggtcaagcagggttcgggcaacttcggcttcaacgcc
gcgaccgacacctacggcgacatgatcgagatgggtattctcgacccggccaaggtcacc
cgttcggccctgcaagctgctgcttccatcggcggcctgatgatcaccaccgaggccatg
gttgccgaagcggctgacgacaaaggcccggccatgcctgatatgggtggcatgggcggt
atgggtggcatgggcggcatgatgtaa
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