Ectopseudomonas alcaliphila: UYA_20045 Help Entry UYA_20045         CDS       T06680                                  Name (GenBank) hypothetical protein   KO K03086   RNA polymerase primary sigma factor Organism pall  Ectopseudomonas alcaliphila Pathway pall02040   Flagellar assembly Brite KEGG Orthology (KO) [BR:pall00001]  09140 Cellular Processes   09142 Cell motility    02040 Flagellar assembly     UYA_20045  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:pall03021]     UYA_20045 Transcription machinery [BR:pall03021]  Prokaryotic type   Bacterial type    RNA polymerase     Sigma factors      UYA_20045 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Sigma70_r2 Sigma70_r4 Ank_2 Ank_5 Ank Ank_3 Motif Other DBs NCBI-ProteinID:  APU31906 LinkDB All DBs Position complement(4378488..4381112) Genome browser AA seq 874 aa AA seqDB search MNPLLRMASIAGVEVAVKLHIARGDDLNARDNAGATPLMLAAARRKKGVVRLLLTAGANP ELLDSQGVSTLAYAEKGGCSECIALLRNALDVLDPIKESEVPGEASSLPAESTQANATKA DTSQVSLSREFDSCKAEDEPVCMETQLKKVAEVDGRFIPRSSTSGEGPFLNVEESLTVKQ ALPVVMGRLSNLIDIDDEPLESGFESDWLAEPEAVAPKGDDTVAKGTSALQEVIGRHKAI DTDVEWDDIDLFLPVRALPLAHDEGEGVRGLLLRALREGAVSEADLIEVCRGADDCRNEE SERLLAFVLGDLGVVIDESGAWAYQSDLTEPTAEEELLLVEALEFAEDLASGRNDPLRYY VKGLKADLLRAEEEISLGREMEEAGAQALDALSGWPAGLSMVFEAADRVARGEADYGIFS SEIAPGEGDEESIGSAAIEDDAEKDEEVASDPKGAAFLSAISAARSAGGDQVRVRSALAA ACLSRGFLLELARKAADPAGETFVSAVRRQVGARERMILANLRLVYSTARKYMWSELPFD DLVQEGNIGLIKAVERYDWRKGFRFSTYAMWWIRQQISRAIDNKARTIRVPVHVHKDALP ILRQRALYENKTGRPETEIETSRRMGIPIDKIRFFLAAFDDVVSLDEVSRDTGLPRIDTL VEFETSDPAPAVEEDSLRELILNVIGSLDERAAEVIKLRFGLGGEEPMTLEEVGLRFNVT RERIRQIESKALGKLSTPARKEKLALYMGDQFEWKLPPAPPSSSAEMPQSPEDRHAREVT CDQQLADPLKDVFQSGEQPVSPRSPEAVSERQYELLSELLEEARMLGLTVEDARLHGGQI RVSFSARSDAAIRSIARKLMNAGFALHLGNTYVK NT seq 2625 nt NT seq  +upstreamnt  +downstreamnt atgaaccctttactccgcatggcgtcgattgctggcgttgaggttgctgtcaagctccat atcgctaggggcgatgacctaaacgcccgggacaacgccggcgccactcctcttatgctt gccgccgcaagaagaaaaaagggtgttgtgcggcttcttttgactgctggagccaatccg gaactgctcgactctcaaggggttagcaccctggcctacgcggagaaggggggatgttct gaatgtatcgctctgctgcgaaatgctctggatgttctggacccgataaaagagagcgag gtgcccggagaggcttcgtccctgccggctgagtcaacccaggccaatgccacaaaggca gatacctctcaggtctccctctctagagagtttgattcctgcaaagcggaggatgagccg gtctgtatggaaactcagctcaaaaaagtggctgaggttgatggccgtttcattcctaga tcctctacctctggtgaagggccttttctgaatgtggaggagtcgctcaccgtcaaacaa gcattacccgtcgttatggggaggctgtcaaacctcatcgatattgacgacgaacctctt gagtctggatttgaaagcgactggttagcggagccggaggcggttgccccgaagggtgac gataccgttgccaagggaaccagtgcacttcaggaagtgatcggtcggcacaaagctatc gatactgatgtggaatgggacgacattgacctgttcctccccgtcagggcgcttccgttg gcgcatgacgagggcgaaggcgtccgtggtttgctactccgggcgctgcgtgagggtgct gtatccgaagccgatcttatcgaggtctgtcgaggggctgacgactgtcgcaacgaagag tctgagcgattgctggcctttgttttgggcgatctgggtgtggtgatcgacgaatccggg gcgtgggcttatcagtcggatctgactgagccaacggccgaagaggagctgttattagtt gaggccctggagtttgcggaggacctggcatccggtcgcaacgaccctttgcgatactac gtcaaaggactcaaagctgacctgcttcgggccgaagaagaaatttctttgggacgtgag atggaggaggccggggctcaggcgctggacgctctttctggctggcccgcgggcctttct atggttttcgaggctgctgatagggttgctcgtggagaagctgattatggaatatttagt tccgagattgcgccaggtgagggagatgaggagagcattgggtcggcggcaattgaggac gatgctgaaaaagatgaagaagtagcctctgatccaaagggggcagctttcctctccgca atctccgcagcaagatctgcgggcggagatcaagtccgagtgcgctcagcacttgcagct gcgtgcctttcaagaggcttcctgttagagcttgcacgtaaagcagccgacccggcgggc gagactttcgtatctgcagttcggcgccaggtcggtgcaagggagcggatgatcctcgct aacctgcgcttggtgtactccactgccaggaaatatatgtggtctgagcttcccttcgat gatctggtgcaggaggggaatatcggtctgatcaaggccgttgagcgctatgactggcga aagggatttagattttccacttatgcaatgtggtggatccgtcagcagatatctcgcgca atagacaacaaggctaggaccattcgtgttccggtgcacgttcacaaagacgccttgcct atcctgcgccagagggcgctatatgaaaacaagacagggcgccctgaaaccgaaatcgag acgtcgcgtcggatggggatacccatcgataaaatcagatttttcctggcagcttttgat gatgtcgtctccttggatgaggtcagcagagatactggacttcctcgtatcgacaccttg gtggagtttgagacttcggatcctgctcctgcagttgaggaggactctcttcgggagctc attctcaacgttattggtagccttgatgagcgtgccgctgaggtaataaagcttcgcttt ggtcttgggggcgaggagcccatgactttggaggaggtggggcttcgattcaatgttact cgcgaacgaattcgacaaatagaatcaaaagccttggggaaattatccacccctgcaagg aaagaaaaacttgccctgtacatgggcgatcaatttgagtggaagcttccccccgcaccc ccttcctcctcagcggaaatgccacaatcgcccgaagataggcatgctcgagaggtgacg tgtgatcaacagctcgctgatccgctgaaggatgttttccaatcgggcgagcagcctgtg tcgccgagaagccctgaggcagtatccgagcgtcaatatgagctgctttccgagcttctc gaagaggctcgaatgttagggcttacggtagaggacgctcgtctccatggcggacagatc cgcgtgtctttttcggcacggtcagatgccgctattcgcagtattgcccggaaactcatg aatgccggatttgcccttcatttaggaaatacctacgtcaaatga

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