Ectopseudomonas alcaliphila: UYA_20450
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Entry
UYA_20450 CDS
T06680
Name
(GenBank) protocatechuate 3,4-dioxygenase subunit beta
KO
K00449
protocatechuate 3,4-dioxygenase, beta subunit [EC:
1.13.11.3
]
Organism
pall
Ectopseudomonas alcaliphila
Pathway
pall00362
Benzoate degradation
pall00624
Polycyclic aromatic hydrocarbon degradation
pall01100
Metabolic pathways
pall01120
Microbial metabolism in diverse environments
pall01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
pall00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
UYA_20450
00624 Polycyclic aromatic hydrocarbon degradation
UYA_20450
Enzymes [BR:
pall01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.3 protocatechuate 3,4-dioxygenase
UYA_20450
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Motif
Pfam:
Dioxygenase_C
PCDO_beta_N
CarboxypepD_reg
NOMO1-like_2nd
Motif
Other DBs
NCBI-ProteinID:
APU31982
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All DBs
Position
complement(4468166..4468885)
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AA seq
239 aa
AA seq
DB search
MPAEDNRRFVIRDRNWHPKALTPDYKTSIARSPRQALVSIPQSISETTGPDFSHLKFAEH
DNDLLLNFNNGGLPIGERIIVSGRVMDQYGKPIPHTLVEMWQANAGGRYRHKNDRYLAPL
DPNFGGVGRALTDSEGRYIFRTIKPGPYPWRNNPNDWRPAHIHFSLNGPSIATRLITQLY
FEGDPLIPLCPIVKSIANPDAVQTLIAKLDMSTANPMDCLAYRFDIVLRGQRKTHFENK
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgcctgccgaggacaatcgccgtttcgtcattcgtgaccgcaactggcaccccaaagcc
ctgacgcccgattacaagacctccatcgcccgttcgccgcgccaggcgctggtgagcatc
ccgcagtcgatctccgagaccaccggcccggacttctcgcacctgaagttcgccgagcac
gacaacgacctgctgctcaacttcaacaacggtggcctgcccatcggcgagcgcatcatc
gtttccggtcgggtgatggatcagtacggcaagccgatcccgcataccctggtggaaatg
tggcaggccaacgccggtggccgctaccggcacaagaacgaccgctatctggcgccactc
gaccccaacttcggcggtgtcggccgtgccctgaccgacagtgaagggcgttacatcttc
cgcaccatcaagcccggcccctatccgtggcgcaacaaccccaacgactggcgtccggcg
cacatccacttctcgctcaatggcccgtcgatcgccacgcggctgatcacccagctgtat
ttcgagggtgacccgttgattccgctatgcccgatcgtcaagtccatcgccaacccggac
gcggtgcagacgctgatcgccaagctggacatgagcacggccaacccgatggattgcctg
gcctaccgcttcgatatcgtgttgcgcgggcagcgtaaaacccatttcgagaacaagtga
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