Ectopseudomonas alcaliphila: UYA_20655
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Entry
UYA_20655 CDS
T06680
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
pall
Ectopseudomonas alcaliphila
Pathway
pall03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pall00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
UYA_20655
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pall03400
]
UYA_20655
DNA repair and recombination proteins [BR:
pall03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
UYA_20655
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
UYA_20655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
BCA_ABC_TP_C
AAA_16
nSTAND1
AAA_23
RsgA_GTPase
DnaJ_CXXCXGXG
nSTAND3
Viral_helicase1
cobW
Zn_ribbon_8
AAA_25
Motif
Other DBs
NCBI-ProteinID:
APU32022
LinkDB
All DBs
Position
4507134..4509968
Genome browser
AA seq
944 aa
AA seq
DB search
MDKILIRGARTHNLKNIDLTLPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLSMMEKPDVDTIEGLSPAISIEQKSTSHNPRSTVGTITEIYDYLRLLYARAGIPRC
PDHDVPLEAQTVSQMVDQVLALPEGRKLMLLAPVIRERKGEHLSVFEELRAQGFVRARVN
GKLHELDELPKLDKQKKHSIDVVVDRFKVREDLQQRLAESFETALGLADGIALIAPMDDE
PGEEIIFSARFACPHCGHSISELEPKLFSFNNPAGACPTCDGLGVKQFFDAKRLVNGELT
LAEGAIRGWDRRNVYYFQMLGSLAAHYGFSLEEPFDDLAAEHQKVILFGSATQSVDFKYL
NDRGDIVKRSHPFEGIIPNLERRYRETESASVREELAKFLSTQPCPDCRGTRLRREARHV
WVGEKTLPAVTGLPVGDACDYVANLHLTGRRGEIAEKILKEIRERLQFLVNVGLDYLTLD
RSADTLSGGEAQRIRLASQIGAGLVGVMYILDEPSIGLHQRDNERLLGTLNHLRNLGNTV
IVVEHDEDAIRMADYVVDIGPGAGVHGGRIVAEGTPDEVMNHPDSLTGKYLSGREKIRYP
AQRTPRDKKKLLKLKGARGNNLRNVDLEIPVGLLTCITGVSGSGKSTLINNTLFPLTATA
LNGATTLEAAPHDSFDGLQHLDKVVDIDQSPIGRTPRSNPATYTGLFTPIRELFAGVPES
RSRGYGPGRFSFNVKGGRCEACQGDGVIKVEMHFLPDIYVPCDVCKGKRYNRETLEVKYK
GKSITEVLDMTIEEARAFFDAVPAIARKLQTLMDVGLSYIKLGQSATTLSGGEAQRVKLS
RELSKRDTGKTLYILDEPTTGLHFADIQQLLDVLHRLRDHGNTVVVIEHNLDVIKTADWL
VDLGPEGGSKGGMIIATGTPEDVAGNPASHTGHFLKPLLERDRA
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
gtggacaagattctgattcgtggggcccgcacccacaacctgaaaaacatcgacctgacc
ctgccgcgcgacaaactgatcgtgatcaccggcctgtccggctccggcaagtcctccctg
gctttcgataccctttacgcggaaggccagcgccgttacgtcgagtcgctgtcggcttac
gcccggcagttcctgtcgatgatggaaaagcccgatgtcgacaccatcgaaggcttgtca
ccggcaatttccatcgaacagaaatccacctcgcacaacccgcgctcgaccgtcggcacc
atcaccgaaatctacgattacctgcgcctgctgtatgcccgcgccggtattccgcgttgc
ccggaccatgacgtgccactcgaagcgcaaaccgtcagccagatggtcgaccaggtgctg
gcgctgccggaaggccgcaagctgatgctgctggcgccggtgatccgcgaacgcaagggc
gaacatctgtcggtgttcgaggagctgcgcgcgcagggcttcgtccgcgcacgggtcaat
ggcaagctgcatgagctggacgagctgcccaagctggacaagcagaagaagcactccatc
gacgtggtggtggaccgcttcaaggtccgtgaagatctgcagcagcgtctggccgagtct
ttcgagaccgccctcggcctggccgacggcatcgccctgattgctcccatggatgatgag
ccgggcgaagagatcatcttctccgcgcgcttcgcctgcccgcactgcggccactcgatc
agcgagctggaacccaagctgttctccttcaacaacccggccggcgcctgcccgacctgc
gacggcctgggcgtgaagcagttcttcgacgccaagcgcctggtcaatggcgagctgacc
ctggccgaaggcgccatacgcggctgggaccggcgcaacgtctactacttccagatgctc
ggttcgctggccgcacactatggtttcagcctcgaagagcccttcgacgacctggccgcc
gaacaccagaaagtcattctgttcggcagcgctacgcagagcgtcgacttcaagtacctc
aacgaccgcggcgacatcgtcaaacgttcgcaccccttcgagggcatcattcccaacctc
gagcgccgctaccgcgagaccgagtcggccagcgtgcgcgaggagctggccaagttcctc
agcacccagccctgccccgattgccggggcacgcgtctgcgccgcgaagcgcgacatgtc
tgggtcggcgagaagaccctgccggcggtgaccggcctgccggtcggcgatgcctgcgat
tacgtcgccaacctgcacctgaccgggcggcgcggcgagatcgccgagaagatcctcaag
gaaatccgcgaacgcctgcagttcctggtcaacgtcggcctcgattatctgaccctggat
cgcagcgccgacaccctgtccggcggcgaagcgcagcgcatccgcctggccagccagatc
ggcgccggcctggtgggcgtgatgtacatcctcgatgagccctccatcggcctgcaccag
cgcgacaacgagcgcctgctgggcacccttaaccacctgcgcaacctgggcaatacggtg
atcgtggtcgagcacgacgaggacgccatccgcatggccgattacgtggtcgatatcggt
ccgggcgccggtgtgcatggcggccgcatcgtcgccgaaggcacgccggacgaggtgatg
aatcaccccgactcgctgaccggcaaatacctgtccggccgtgagaagatccgctatccg
gcgcagcgcaccccgcgtgacaagaagaaactgctcaagctcaagggcgcacggggcaac
aacctgcgcaatgtcgatctggagattccggtaggtctgctcacctgcatcaccggcgtg
tccggctcgggcaagtcgacgctgatcaacaacaccctgttcccgctcacggctacggca
ctgaacggtgcgaccaccctggaagcggcgccgcacgattccttcgacggcctgcagcac
ctggacaaggtggtcgacatcgaccagagcccgatcggccgcacgccgcgctccaacccg
gctacctacacaggtctgttcacaccgatccgcgaactcttcgccggtgtgccggaatcg
cgctcgcgcggttatggcccgggccgattcagcttcaacgtcaagggcgggcgctgcgag
gcgtgccagggcgacggcgtgatcaaggtggaaatgcactttctgccggacatctacgtg
ccgtgcgacgtgtgcaagggcaagcgctacaaccgcgaaaccctggaagtgaagtacaag
ggcaagagcatcactgaagtgctggacatgaccatcgaggaagctcgcgccttcttcgac
gccgtaccggccatcgcccgcaagctgcagacactgatggacgtcggtctgtcctatatc
aagctgggccagagcgcgaccaccctgtccggcggcgaggcgcagcgagtcaagctgagt
cgcgagctgagcaagcgcgataccggcaagaccctgtatatcctcgatgagccgaccacc
ggcctgcacttcgccgatatccagcaactgctcgacgtgctgcaccgcctgcgcgaccac
ggcaataccgtggtggtgatcgagcacaacctggacgtgatcaagaccgccgactggctg
gtggatctcggccccgagggcggctccaagggcggcatgatcatcgccaccggcacaccg
gaggacgtggccggcaacccggcatcacacaccgggcacttcctcaaaccgttgctggaa
cgcgaccgcgcctga
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