Ectopseudomonas alcaliphila: UYA_20675
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Entry
UYA_20675 CDS
T06680
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
pall
Ectopseudomonas alcaliphila
Pathway
pall03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pall00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
UYA_20675
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pall03021
]
UYA_20675
03400 DNA repair and recombination proteins [BR:
pall03400
]
UYA_20675
Enzymes [BR:
pall01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
UYA_20675
Transcription machinery [BR:
pall03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
UYA_20675
DNA repair and recombination proteins [BR:
pall03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
UYA_20675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
AMIN-like
Motif
Other DBs
NCBI-ProteinID:
APU32026
LinkDB
All DBs
Position
complement(4513445..4514446)
Genome browser
AA seq
333 aa
AA seq
DB search
MQISVNEFLTPRHIDVQEVSPTRAKITLEPLERGFGHTLGNALRRILLSSMPGCAVVEAE
IDGVLHEYSAIEGVQEDVIEILLNLKGLAIKLHGRDEVTLTLAKKGPGVVTAADIQLDHD
VEIVNGDHVIANLASNGALNMKLTVARGRGYEPADARQSDEDESRSIGRLQLDASFSPVR
RVAYVVENARVEQRTNLDKLVIDLETNGTLDPEEAIRRAATILQQQLAAFVDLKGDSEPV
VVEQEDEIDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTEVELLKTPNLGKKSLT
EIKDVLASRGLSLGMRLDNWPPASLKKDDKATA
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgcagatttcggtaaatgagttcctgaccccccgtcacatcgatgtgcaggaggtcagt
ccgacccgcgccaagatcactctcgagcctctcgagcgtggctttggccataccctgggc
aacgcgctgcgtcgcatcctgttgtcctccatgcctggctgtgcagtagtcgaggccgag
atcgatggcgtactccatgagtactccgcgatcgaaggtgtgcaggaagatgtcatcgag
atcctgctcaacctgaaaggtctggctatcaagctgcacggccgtgacgaagtgaccctg
actctggctaagaagggcccgggcgtagttaccgctgccgatattcagctggatcacgat
gtcgaaatcgtcaatggcgaccacgtaatcgccaacctggcctccaatggcgcgctgaac
atgaagctcaccgtggctcgtggtcgcggctatgagccggctgacgcgcgtcagagcgac
gaagatgaaagccgcagcattggtcgcttgcagctggatgcttcgttcagccctgtgcgt
cgggttgcttacgtggtggaaaacgcccgtgtcgagcagcgcaccaacctggacaaactg
gttatcgacctggaaaccaacggtactctggaccctgaagaggctatccgtcgtgccgcg
accatcctgcagcagcagctggccgcgttcgtcgacctcaaaggtgacagtgagccagtg
gtggtcgagcaggaagacgagatcgatccgatcctgctgcgtcctgtcgatgacctggaa
ctgaccgtacgttcggccaactgcctcaaggcagagaacatctactacatcggtgacctg
attcagcgcaccgaagtagagctgctcaaaaccccgaacctgggcaagaaatccctgacc
gaaatcaaggatgttctggcttctcgcggtctgtccctcggtatgcgcctcgacaactgg
ccgccggcaagtctgaagaaagacgataaggccactgcctga
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