Ectopseudomonas alcaliphila: UYA_22010
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Entry
UYA_22010 CDS
T06680
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pall
Ectopseudomonas alcaliphila
Pathway
pall00260
Glycine, serine and threonine metabolism
pall00460
Cyanoamino acid metabolism
pall00630
Glyoxylate and dicarboxylate metabolism
pall00670
One carbon pool by folate
pall00680
Methane metabolism
pall01100
Metabolic pathways
pall01110
Biosynthesis of secondary metabolites
pall01120
Microbial metabolism in diverse environments
pall01200
Carbon metabolism
pall01230
Biosynthesis of amino acids
pall01240
Biosynthesis of cofactors
pall04981
Folate transport and metabolism
Module
pall_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
pall00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
UYA_22010 (glyA)
09102 Energy metabolism
00680 Methane metabolism
UYA_22010 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
UYA_22010 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
UYA_22010 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
UYA_22010 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
UYA_22010 (glyA)
Enzymes [BR:
pall01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
UYA_22010 (glyA)
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Cys_Met_Meta_PP
Beta_elim_lyase
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
APU32270
LinkDB
All DBs
Position
complement(4794879..4796132)
Genome browser
AA seq
417 aa
AA seq
DB search
MFSKQDQIQGYDDELLAAIDQEERRQEEHIELIASENYCSQRVMEAQGSGLTNKYAEGYP
GKRYYGGCEYVDKVEQLAIDRAKALFGADYANVQPHSGSSANSAVYLALLNAGDTILGMS
LAHGGHLTHGAKVSSSGKLYNAVQYGLDTATGLIDYDEVERLAVEHQPKIIVAGFSAYSK
TLDFPRFRAIADKVGALLFVDMAHVAGLVAAGLYPNPIPFADVVTTTTHKTLRGPRGGLI
LAKANEEIEKKLNSAVFPGAQGGPLMHVIAAKAVCFKEAMEPEFKAYQQQVIDNAQAMAK
VFIERGYEVVSGGTDNHLFLLSLIKQGLTGKEADAALGRAGITVNKNAVPNDPQSPFVTS
GIRIGTPAVTTRGFKVAQCQALAGWICDILDHLGDADVEAQVAKLVAGLCADYPVYR
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcagcaagcaggatcagattcagggttacgacgacgagttgctcgcggcgatcgat
caggaagaacgccgtcaggaagagcacatcgagctgatcgcctcggagaactactgcagc
cagcgggtgatggaagcgcagggcagcggcctgaccaacaagtacgccgaaggttatccg
ggcaagcgctactacggcggttgcgagtacgtcgacaaggtcgagcaactggccatcgac
cgcgccaaggcgctgttcggcgccgattacgccaacgtccagccgcactccggttcctcg
gccaacagcgccgtgtacctggcgctgctcaatgccggcgacaccatcctcggcatgagc
ctggctcacggcggccacctgacccacggcgccaaggtgtcgtcctcgggcaagctgtac
aacgccgtgcagtacggcctggacactgccaccgggctgatcgactacgacgaggtcgag
cgcctggccgtggagcaccagccgaagatcatcgtcgccggcttctccgcctactccaag
accctcgacttcccgcgctttcgcgccatcgccgacaaggtcggcgcgctgctgttcgtc
gatatggcgcacgtggcgggcctggtcgctgcgggcctgtacccgaacccgattcccttt
gccgacgtggtcaccaccactacgcacaagaccctgcgcggcccgcgcggcggcctgatc
ctggccaaggccaacgaagagatcgagaagaaactcaattccgcagtctttccgggcgcc
cagggtggcccgctgatgcacgtgatcgcggccaaggcggtgtgcttcaaggaagccatg
gagccggagttcaaggcctaccagcagcaggtcatcgacaacgcccaggccatggccaag
gtgttcatcgagcgcggttacgaggtggtgtccggcggcaccgacaatcacctgttcctg
ctcagcctgatcaagcagggcctgaccggcaaggaagccgacgccgccctcggtcgcgcc
ggcatcaccgtgaacaagaacgccgtacccaacgacccacaatcgccgttcgtgacttct
ggcatccgtatcggcacgccggcggtgaccacccgtggcttcaaggtcgctcagtgccag
gcgctggccggctggatctgcgacatcctcgatcacctcggcgatgccgatgtcgaggcg
caggtggccaagctggtcgcagggctgtgcgcggactaccccgtataccgctaa
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