Ectopseudomonas alcaliphila: UYA_22110
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Entry
UYA_22110 CDS
T06680
Name
(GenBank) hypothetical protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pall
Ectopseudomonas alcaliphila
Pathway
pall03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pall00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
UYA_22110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pall03400
]
UYA_22110
Enzymes [BR:
pall01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
UYA_22110
DNA repair and recombination proteins [BR:
pall03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
UYA_22110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4130
SPDY
Motif
Other DBs
NCBI-ProteinID:
APU32289
LinkDB
All DBs
Position
4822159..4823046
Genome browser
AA seq
295 aa
AA seq
DB search
MHSLRFDGSFATWRQAARRALLQGLAPHQLQWLDEEAAPGLFDQPAERAPEPNGRLRVSP
ELLELLESAAQYRGEERWSLLYRVLWRFVQGERSAVLAGDPDGSELHRRLKAVRREAHHL
HAFVRFQPSKAQGAPDFVAWFEPAHDILAAASGHFAERLGKHSWLIATSRDGVYWDGQRL
QHERRCPAQWQAWARQPEDDGQALWRAYYGSTFNPARLNRTVMQQHLPLRFWKHLPEGPL
IPQLMSEARAGAQRDGQALVLAGRKGKRIAQINEGDAARPPSGSVSGSDAPDLPR
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgcacagcctgcgtttcgacggcagcttcgccacctggcgccaggccgcgcgccgtgca
ctgctgcagggcctggcaccgcaccagttgcagtggctggacgaagaagcggcgcctggc
ctgttcgaccagcccgccgaacgcgcgccggagcccaatggccgcctgcgcgtatcgccc
gaactgctggagctgctggagagcgccgcacagtaccgtggcgaggagcgctggagcctg
ctctaccgcgtgctctggcgcttcgtacagggcgaacgcagcgccgtgctggccggcgac
cccgacggcagcgagctgcatcgccggctcaaggcggtgcgccgcgaggcccatcacctg
catgccttcgtgcgctttcagccgagcaaggcgcaaggcgcgccggacttcgtcgcctgg
ttcgaacccgcgcatgacatcctggccgcggccagtggccatttcgccgagcgcctgggc
aagcacagctggctgatcgcaacgtctcgggacggtgtgtactgggatggccaacgcctg
cagcacgagcgccgctgcccggcgcaatggcaagcctgggcacggcagcccgaggatgac
ggccaggccctgtggcgtgcctattacggcagcaccttcaacccggcgcggctcaaccgc
acggtgatgcagcaacatctgccactgagattctggaagcacctgccggaaggcccgctg
attccgcaactgatgagcgaagcacgcgccggcgcgcaacgcgatggccaggcattggtg
ctggcaggcagaaagggcaaacgtatcgcccagataaacgagggggacgcagcgcgtccc
ccgtcaggtagcgtcagcggaagcgacgccccggatcttcctcgctga
DBGET
integrated database retrieval system
