KEGG   Ectopseudomonas alcaliphila: UYA_23860
Entry
UYA_23860         CDS       T06680                                 
Name
(GenBank) type I-F CRISPR-associated helicase Cas3
  KO
K07012  CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
Organism
pall  Ectopseudomonas alcaliphila
Brite
KEGG Orthology (KO) [BR:pall00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:pall02048]
    UYA_23860
Enzymes [BR:pall01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     UYA_23860
Prokaryotic defense system [BR:pall02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Type I signiture cas proteins
    UYA_23860
SSDB
Motif
Pfam: Cas3_I-F_Cas2 Cas3-like_C_2 Cas3-like_C Cas3_HD DEAD ResIII
Other DBs
NCBI-ProteinID: APU32610
LinkDB
Position
5189426..5192776
AA seq 1116 aa
MNVLLIAQCDKRALVESRRILDQFAERRGERTWQTPITQAGLDTLRKLLKKSARRNTAVA
CHWIRGKDHSELLWIVGDASRFNEQGAVPTNSTRRDVLRKDDENDWHSAEDLRLLSTLAA
LLHDLGKASLAFQNRLKPGAPMERNLYRHEWTSLRLFQAFVGNDDDPTWLARLANPSEQD
DASWLSRLQRDGLDPDCDKPFRHLPPLAAALAWLVLTHHRLPLMPSEDTRLGSKIRHFQL
GMLKNLPGDIDASWNEHCTTQDRAQIEPYWHFPHGLPVTTERWRKRASKQAQRLLVLLPR
RPQRDWLGSPYLMHLARLNLMLADHHYSSLTGPGRVQGETGYPLWANTERKSGKFNQGLD
EHLLGVEANAGLIGHRLADFERSLPRLSRHKGLKKRSGNERFRWQDKAFDLAAGMREQAA
RHGAFIVNMASTGCGKTLGNARIMYALSDPERGMRCAFALGLRSLTLQTGRAFRQRLRLD
EDDLAIRVGGAANSTLFEHQQALAERSGSASSQALFEDDGHVRFDGNVDAHPLLNKVIHE
PQVRALLIAPVLVCTIDHLTPATESQRGGRQIAPMLRLMSGDLVLDEPDDFDIADLPALA
RLVHWAGLLGSRVLLSSATLPPALIQGLFEAYRAGRVEYQRHRGERPGELPAIACAWVDE
QRQSRLDCSDSASFSAAHLDFAQRRHAWLATQPARRQAQLLPLRFASQRPEEIRQAFAEQ
ILTAARSLHDTNATTDPHSGKRVSFGLVRMANIEPLFDVALALFRLGAAEGTRIHLCVYH
SQFPLLLRSAIENRLDTTLQREQPEAVFALPEIRQRLQRHAEPDQLFIVLGSPVTEVGRD
HDYDWALVEPSSMRSLIQLAGRVRRHRPEPWNATNVQIFGSNLRHAERRDQPAFCKPGFE
TEHPWRLNSHRLDKLLNAEQYQQIDARPRILERPAPLDAKGNLVDLEHARLQGWMLQPAA
PDPATLSERERRRQSSQPREMNAHDGWSQPLLHLTALAQQQQPFRLDTQPRVELILLPDE
DDEDYQLHRIDPGQRRYEQIYVPVENSLLQHIADHELAGPRISPWGATDYLQALSELAQE
LDMSLEGCAKRFGTVSLPESERGWRFHPALGFARRR
NT seq 3351 nt   +upstreamnt  +downstreamnt
atgaacgtgctgctgatcgcccagtgcgacaaacgcgccctggtggagagccggcgcatc
ctcgaccagtttgccgagcgccgcggcgagcgcacctggcaaacgccgatcacccaggcc
gggctggataccctgcgcaagctgttgaagaagagcgccaggcgcaataccgccgtggcc
tgccactggatacgcggtaaggaccacagcgaactgctgtggatagtcggcgacgccagc
cgcttcaacgaacagggcgcggtgccgaccaacagcacccgccgcgacgtgttgcgcaag
gatgacgagaacgactggcacagcgccgaggatcttcgcctgctcagcaccctggccgcg
ttgctgcatgatctgggcaaagccagcctggccttccagaaccgcctcaaacccggcgcg
cccatggagcgcaacctgtatcgccatgaatggacatcgctgcgtctgttccaggccttc
gtcggcaacgacgacgacccgacctggctggcgcgcctggccaaccccagcgagcaggat
gacgccagctggttgagccgcctgcaacgcgacggcctcgaccccgactgcgacaagccc
tttcgccacctaccgcccctggccgccgccctggcctggctggtactgacccatcaccgc
ctgcccctgatgcccagcgaggacacgcgcctgggcagcaagatccgccacttccagctc
ggcatgctgaagaacctgccaggagatatcgacgccagctggaacgagcactgcaccacc
caggacagggcgcagatcgaaccttactggcacttcccccacggcctgcccgtaaccacc
gagcgctggcgcaaacgggccagcaagcaggcccaacgtctgctcgtcctgctgccacgc
cgcccacagcgagactggctgggcagcccctacctgatgcacctggcacgcctgaacctg
atgctcgccgaccaccactattccagtctcaccggcccaggccgggtgcagggcgagacg
ggctatccgctgtgggccaataccgagcgcaaaagcggcaagttcaaccagggcctcgac
gaacatctgctgggggtcgaggccaatgccgggctgatcggccatcgcctggccgacttc
gagcgcagcctgccacgcctgagccggcacaagggcttgaagaagcgcagcggcaacgaa
cgctttcgttggcaggacaaggccttcgacctggccgccggcatgcgcgaacaggctgct
cggcacggtgcgttcatcgtcaatatggcctccaccggttgcggcaagaccctgggcaat
gcacgcatcatgtatgccctgagcgaccccgagcgcggcatgcgctgtgccttcgccctt
ggcctgcgcagcctgaccctgcaaaccgggcgcgccttccgccaacgccttcgactggac
gaggatgacctggccattcgcgtcggtggcgcggccaacagcaccttgttcgagcaccag
caggcgctcgccgaacgcagcggctcggcctccagccaggcactattcgaagacgatggt
catgtacgcttcgacggcaatgtggacgcccatccgctgctcaacaaggtgatccacgaa
ccccaggtgcgcgccctgctgatcgcgccggtactggtctgcaccatcgaccacctgacc
cctgccaccgagagccagcgcggcgggcgacagatagcgcccatgttgcgcctgatgagc
ggcgacctggtgctcgacgagccggacgatttcgatatcgccgacctgcctgccctggcg
cgtctggtgcattgggccgggctgctgggcagccgcgtgctgctgtcctcagccaccctg
ccgcccgccctgatccagggtttgttcgaggcctatcgcgccgggcgtgtcgagtatcag
cgccaccgtggcgaacgccctggcgagctgccggccatcgcctgtgcctgggtcgatgaa
cagaggcaaagccgcctggactgtagcgacagcgccagtttcagcgccgcccacctggac
tttgcccagcgccgccacgcctggctcgcgacgcagcccgcgcgacgccaggcgcaactg
ctgcccctgcgctttgccagccaacgcccggaggagattcgccaggctttcgccgaacag
atactgaccgccgcccgcagcctgcacgacaccaacgccacaaccgacccgcacagcggc
aagcgcgtaagcttcggcctggtacgcatggccaatatcgagcccctgttcgacgtggcg
ctggccctgtttcgcctgggcgccgccgaaggcactcgcatccacctctgtgtgtaccac
tcgcagttcccgctgctgctgcgctcggccatcgaaaaccgcctggacaccaccctgcaa
cgtgaacagccggaagcggtattcgccctgccggaaatccgccagcgcctgcagcgccac
gccgagccggatcaactgttcatcgtgttgggctcgcccgtgaccgaagtgggccgcgac
catgattacgactgggcactggtcgaaccctcgtcgatgcgctcgctgatccagttggct
gggcgcgtacggcgccatcgccccgagccctggaacgcaaccaatgtgcagatattcggc
agtaacctgcgccatgccgaacggcgcgaccagccagccttctgcaaacccggtttcgag
acggaacacccctggcggctgaacagccatcgtctggacaagctgctgaatgctgagcag
taccagcagattgacgcccgcccgcgcattctcgagcgccccgcgccactggatgccaag
ggcaacctggtcgatctggaacacgcgcgcctgcaaggctggatgctgcaacccgccgcc
cccgacccggccacgctgtcggagcgcgaacggcggcggcaaagcagccagccgcgtgaa
atgaatgcccatgacggctggagccagccgctgttgcacctcacggccctggcccagcag
caacaacccttccgcctcgacacccagccaagggtcgagctgatcttgctgccggacgaa
gacgatgaggattaccagctacaccgcatcgaccccggccagcgccgctacgagcagatc
tacgtgccggtggaaaacagcctgctccagcacatcgccgaccacgaactggccggcccg
cgcatcagcccctggggtgctaccgactacctccaggccttgtctgaactggcgcaggag
ctggacatgagtctggagggctgcgccaagcgcttcggcaccgtcagtctgcccgagagc
gagcgaggctggcgctttcaccccgcgctgggctttgccaggcgcagatga

DBGET integrated database retrieval system