Ectopseudomonas alcaliphila: UYA_24090
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Entry
UYA_24090 CDS
T06680
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pall
Ectopseudomonas alcaliphila
Pathway
pall03420
Nucleotide excision repair
pall03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pall00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
UYA_24090
03430 Mismatch repair
UYA_24090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pall03400
]
UYA_24090
Enzymes [BR:
pall01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
UYA_24090
DNA repair and recombination proteins [BR:
pall03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
UYA_24090
MMR (mismatch excision repair)
Other MMR factors
UYA_24090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
Viral_helicase1
AAA_11
DUF3553
Motif
Other DBs
NCBI-ProteinID:
APU32654
LinkDB
All DBs
Position
5243831..5246014
Genome browser
AA seq
727 aa
AA seq
DB search
MQNDLDHRLTTLNPAQHHAVTTPPGHQLVLAGAGSGKTRVLVHRIAFLIQRLDVSPHSIL
SVTFTNKAAAEMRHRIEDVLGHAPAGMWVGTFHGLAHRLLRAHWKEAKLAENFQILDSDD
QQRLIKRVIRDLGLDEQRWPAKQAQWFINGQKDEGIRPQGIQASGDLFLATMRSIYEAYE
AACARTGVIDFAELLLRALDLWRDNAGLLEHYQRRFRHILVDEFQDTNAVQYAWLRFLAK
GGESLMVVGDDDQSIYGWRGAKIENIQQFDSDFADAEIIRLEQNYRSTANILNAANALIA
NNQGRLGKELRTDVGDGEPLALYAAFNEHDEARYVVETIEDALRKDGLKRSEIAILYRSN
AQSRVLEEALLREKIPYRIYGGQRFFERAEIKNAMAYLRLLDGRGNDAALERIINVPARG
IGEKTIETIREYARAHDVHMWEAIRLMLTVKALPARASGALAGFIELIDSLAEQVLAMPL
HQMTQVVIEKSGLLAYHEAEKGEKGQARVENLEELVSAARTFENDEDDELTPLQAFLTHA
SLEAGDTQAAENEDSIQLMTLHSAKGLEFPLVFLVGMEEGLFPHKMSLEEPGRLEEERRL
AYVGITRAMQKLVISYAETRRLYGSETYNKVSRFVREIPAPLIQEVRLSNSVSRPMSTSS
MGGGSLFAGSAIPQTPFNLGQRVRHSLFGEGTILNFEGAGAQARVQVNFENEGSKWLMLA
YAKLEAY
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaatgacctcgatcacagactcaccaccctcaatcccgcccagcaccatgcggtt
accacgccgcctggtcatcagctggtgctggccggtgccggctcgggcaagacccgtgtg
ctggtgcaccgcatcgccttcctgatccagcgcctggacgtgtcgccgcacagcatcctg
tcggtgaccttcaccaacaaggccgccgccgagatgcgtcaccgtatcgaagacgtgctg
ggccacgcccctgccggcatgtgggtcggcaccttccacggcctggctcaccgcctgctg
cgtgcgcactggaaggaggccaagctggccgagaacttccagattctcgactccgacgat
cagcaacgcctgatcaagcgggtgatccgcgacctcggcctggatgagcagcgctggccg
gccaagcaggcacagtggtttatcaacgggcagaaggacgagggcatccgcccgcagggc
attcaggccagcggcgacctgttcctggccaccatgcgcagcatctacgaagcctacgag
gcggcctgcgcgcgcaccggcgtcatcgatttcgccgagctgctgctgcgtgccctcgat
ctctggcgcgacaatgccggcctgctggagcattaccagcgccgcttccgccatatcctg
gtcgacgagttccaggacaccaacgccgtgcaatacgcctggttgcgctttctcgccaag
ggcggcgagagcctgatggtggtgggtgacgacgatcagtcgatctacggctggcgcggc
gcgaagatcgagaacatccagcagttcgacagcgatttcgccgatgccgagatcatccgt
ctggagcagaactatcgctccacggcgaacatcctcaatgccgccaacgcgctgatcgcc
aacaaccagggccgcctcggcaaggagctgcgcaccgacgtcggtgatggcgagccgctg
gccctgtacgccgccttcaacgagcacgacgaagcgcgctacgtggtggaaaccatcgag
gacgccctgcgcaaggacggcctcaagcgcagcgaaatcgccattctctatcgctccaac
gcccaatcgcgggtgttggaagaggcgctgctgcgcgagaagatcccctaccgcatctac
ggtggtcagcgcttcttcgagcgtgccgagatcaagaacgccatggcctacctgcgcctg
ctcgacgggcgcggcaacgatgcggcgctggagcgcatcatcaacgtgccggcgcgtggc
atcggcgagaagaccatcgagaccatccgcgaatacgcccgcgcccatgacgtacacatg
tgggaagcgattcgcctgatgctgacggtcaaggcgctgcccgctcgcgcctcgggggcc
ctggccggcttcatcgaactgatcgacagcctggccgagcaggtcctggccatgccgctg
caccagatgacccaggtggtcatcgaaaagagcggcctgctcgcctatcacgaggcggaa
aaaggcgagaagggccaggcccgggtggaaaacctggaggaactggtcagcgccgcacgt
accttcgagaacgatgaagacgacgagctgaccccgctgcaggccttcctcacccatgcc
tcgctggaggccggggacacccaggccgccgagaacgaagacagtattcaactgatgacc
ctgcacagcgccaagggcctggaattccccctggtgttcctggtgggcatggaagagggt
ctgttcccgcacaagatgagcctggaagaaccgggccgattggaagaagaacgccgcctg
gcctatgtcggcattacccgtgccatgcagaagctggtgatcagctacgccgaaacacgg
cgtctctacggtagcgagacctataacaaggtgtcgcgctttgtccgcgaaatccccgca
ccgctgattcaggaagtacgcctgagcaacagcgtcagccgcccgatgagcaccagctcg
atgggtggcggcagcctgttcgccggcagtgccataccgcaaacgcccttcaacctgggc
cagcgcgtacgtcacagcctgttcggcgaaggcaccatcctcaatttcgagggtgctggt
gcccaggcgcgggtccaagtgaatttcgaaaacgaaggcagtaaatggctgatgctggcg
tacgccaagcttgaagcctattag
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