Paludihabitans sp. MB14-C6: RBG61_00100
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Entry
RBG61_00100 CDS
T09321
Name
(GenBank) exonuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
palm
Paludihabitans sp. MB14-C6
Brite
KEGG Orthology (KO) [BR:
palm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
palm03400
]
RBG61_00100
DNA repair and recombination proteins [BR:
palm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
RBG61_00100
Archaeal homologous recombinant proteins
RBG61_00100
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
Big_15
Motif
Other DBs
NCBI-ProteinID:
WMJ23097
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All DBs
Position
complement(26800..27951)
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AA seq
383 aa
AA seq
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MRIIHTADWHIGKILNDYSLLEDQKYYFDQFIAQLKELKPDALIIAGDLYDRSIPSSDAI
SLLNSILCQIILELKIKTFLISGNHDSKERLSFVGDLLSKSGLYIAGTLSKEIKKIQLTT
QNNEIANFYLLPYIEPHNIKSIYPNQEIKTHNDAIQIYCNDMIENLDTKQINILIAHGFF
QYGSINSMDEASVGGSDLVDAKSFSKFDYVALGHLHSARTIGNEKMRYSGSPLKYSIDEA
NQKKSYTIVDITNEGLEITTKEIKPLRDVRIVEGSFDYLSNKQNHINTDDYVFANITDEQ
IALHAITILKGVFPNILGLKYINLESKNVSDNLQSHAELKEKSNADLFKEFYHNAMDDEL
DLEQMQYIETVFKTLKGEQDDTD
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgcgaattatacatacggcagattggcatatcggaaaaattttaaatgattattcttta
ttagaagatcaaaaatactactttgaccaatttatagcgcagctgaaagagctaaaaccc
gatgcacttattattgcaggagatttatatgatcgatctattccttcttcagacgctatt
tcactactaaattctattctttgtcaaattattttggaattaaaaattaaaacattttta
atttccggaaatcacgattctaaagaacgcctatcttttgttggagatttattatcaaaa
tccggattatatattgctggaacactttcaaaagaaattaagaaaatacaacttactact
caaaataatgaaattgcaaacttttatttattaccatatattgaaccacacaatattaaa
agtatttatccgaatcaagaaattaaaacccataacgatgcaattcaaatatactgcaat
gatatgattgaaaacttagatacaaaacaaatcaacattttaatagcacatggatttttt
caatatggctcaattaatagtatggatgaagcaagtgttggcggcagcgatttagtggat
gccaaatcattttcaaaatttgactatgttgcactaggacatctgcatagtgctagaaca
attggaaacgagaaaatgagatattccggctcacctttaaaatattcaattgatgaagca
aatcaaaagaaaagttatacaattgttgatattacaaatgagggacttgaaataacaaca
aaagaaatcaaaccattgcgggatgttcgtattgttgaaggaagttttgattaccttagc
aacaagcaaaaccatatcaatacagacgactatgtatttgcaaatattaccgatgaacaa
attgcactccatgcgattaccattttaaaaggtgtttttcctaatattcttggtttaaaa
tatattaacctagaaagcaaaaatgttagtgataacctacaatcccacgcagaactgaag
gaaaagtcaaatgcagatttattcaaagaattttatcataacgcaatggacgatgagcta
gatttagagcaaatgcaatatattgaaactgtttttaaaacgctgaaaggagaacaagat
gataccgattaa
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