Paludihabitans sp. MB14-C6: RBG61_00130
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Entry
RBG61_00130 CDS
T09321
Symbol
miaB
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
palm
Paludihabitans sp. MB14-C6
Brite
KEGG Orthology (KO) [BR:
palm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
palm03016
]
RBG61_00130 (miaB)
Enzymes [BR:
palm01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
RBG61_00130 (miaB)
Transfer RNA biogenesis [BR:
palm03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
RBG61_00130 (miaB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
WMJ23103
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All DBs
Position
33178..34602
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AA seq
474 aa
AA seq
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MSQEKKFQLSKNELNVQFDNIDKIKSIYEKKYKDKTLLAHVHSYGCQQNVSDGEKIKGML
ALMGYGFCDSPDEADLVIYNTCAVRENAEDRVFGNVGALKHKKRRNPDMLIGLCGCMTQQ
EHIAEKIKKSYPHVDFVFGTHALPKLPEIMYDAIKQNKRIFDINEYDDEIVEGIPIQRDQ
TFKAWLPIMYGCNNFCTYCIVPYVRGRERSRTSAEIVKEFKGLVAQGYKEITLLGQNVNS
YGKGLEEDINFSQLLRMLNEVKGDFRIRFMSSHPKDATKELIDAIADCDKVCKHFHLPVQ
CGSDRILQLMNRHYTIESYMELIDYARKKVPDIAFTSDIIVGFPQEKYEDFKQTVELVKK
VRFDSIFSFIYSKRVGTKAAEMEDPISVEEKSNWFQELLETQRSIGKERYKECVGKTYRI
LVEGEGKTGAEYLTGRNDGYMIVDFKGEQNLIGQFVNVKITQALNWALLGEIVE
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
ttgtcgcaagaaaagaagtttcaattgagtaaaaatgaattgaatgttcaatttgataat
atagacaaaattaagtcaatctacgaaaaaaaatacaaagataaaacattgctagctcat
gttcactcttatgggtgtcaacaaaatgtaagtgatggtgaaaaaatcaaaggtatgctt
gctttgatgggatatggcttttgcgatagtcccgatgaagctgacttggtaatttataat
acttgtgctgttcgtgaaaacgcagaagaccgtgtattcggtaatgtgggtgcattgaaa
cacaaaaaaagaagaaatcccgatatgctgattggattatgtggttgtatgactcagcaa
gaacatattgccgaaaaaatcaagaaaagttatccacacgttgattttgtattcggtact
catgcattaccgaaacttcctgagatcatgtatgatgcaatcaagcaaaataaacgtatt
tttgatatcaacgaatatgatgacgaaattgttgagggaataccgattcaaagagatcaa
acatttaaagcatggcttcctattatgtatggttgcaataacttttgcacatactgcatt
gttccttatgttcgtggaagagagcgcagtagaaccagtgctgaaattgtaaaagaattt
aaaggtttagtagcgcaaggctataaagagattaccttattaggccaaaatgtgaattcc
tatggtaaagggttagaagaggatattaacttttcccaactgttaaggatgcttaacgaa
gtgaaaggtgactttagaattcgttttatgtcttctcatccaaaggatgcaacaaaagaa
ctaatagatgcaattgctgattgcgataaagtgtgcaaacactttcatttacctgttcaa
tgtggaagtgaccgtattctccaattgatgaaccgtcattataccattgaaagttatatg
gaattgattgattacgcacgtaaaaaggttcctgatattgcgtttacaagtgatattatc
gttggctttccacaagagaaatatgaggattttaaacaaacagtagagttggtaaaaaaa
gtaagatttgattctatcttttcgttcatttattccaaacgagttggtacaaaagctgca
gaaatggaggatccaatttcagttgaagaaaaatcaaattggttccaagagttgcttgaa
acccagcgtagtattggaaaagaacgatataaagaatgtgttggcaaaacttatcgtatt
ttagtcgaaggtgaaggaaaaacaggagctgaatacttaactggccgtaatgatggttat
atgattgttgattttaaaggagaacaaaacttaataggacaattcgtaaacgtaaaaatt
acgcaagcattaaactgggcattgttaggcgaaattgtggaatga
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