Paludicola sp. MB14-C6: RBG61_00295
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Entry
RBG61_00295 CDS
T09321
Name
(GenBank) glycoside hydrolase family 2 TIM barrel-domain containing protein
KO
K01190
beta-galactosidase [EC:
3.2.1.23
]
Organism
palm
Paludicola sp. MB14-C6
Pathway
palm00052
Galactose metabolism
palm00511
Other glycan degradation
palm00600
Sphingolipid metabolism
palm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
palm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
RBG61_00295
09103 Lipid metabolism
00600 Sphingolipid metabolism
RBG61_00295
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
RBG61_00295
Enzymes [BR:
palm01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
RBG61_00295
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_2_C
Bgal_small_N
Glyco_hydro_2_N
LacZ_4
Glyco_hydro_2
Bac_rhamnosid_N
BetaGal_ABD_1
Motif
Other DBs
NCBI-ProteinID:
WMJ23132
UniProt:
A0AA51CPW5
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All DBs
Position
complement(62409..65381)
Genome browser
AA seq
990 aa
AA seq
DB search
MLRNYYQDLNVLNVNTIPNRAYYIPSKPGNISDQKTNNDSVMLLNGDWKFKFYKKVQDFT
FDIDQYDTIPVPSNWQMHGYDAHQYTNVRYPIPYNPPYVPKENPCGLYERTISIKDKESN
RFFLNFEGVDSCHYVYINDQFVGYSQVSHSTSEFDITNFIQNGDNKLQVVVLKWCDGTYL
EDQDKLRMSGIFRDVYVLVRPKEFLFDYQIKTNITSDNTATVCITMNDHETKLQKKIILA
DTNHTIISELSTSECKADIIVNNPILWTAESPYLYYITFETENEVITDTVGIRTIAIENS
IVKVNGKQVKFKGVNRHDSYCDTGYVASLERITADLKLMKQHNINAIRTSHYPNRPELYK
LCDQYGFYVIDEADIEAHGTITMANPANHDLYADIANNPKWTNAIVDRIEKLVQRDKNRP
CVIFWSLGNESGYGCCFREAGKRVKEMDDTRIVHYESMVIPEAEKAKGTEKFEVIDVVSH
MYPSLSWLENDFIGNPNENRPRILCEFAHAMGNGPGDLNRYYDLIYKYDNFCGAFVWEWC
DHTVLVGEKNGKSMYHYGGDFGEFPHDGNFCMDGLVYPDRKPHTGLLELKNAARPAHIHY
KNGKFQIENKLDFTNLNDILYLQWTIKQNGNVIQSGEIRALDVNPHETTELPIELQQLSG
GRVYIKFDMISINETPLVEAGSVLGFEQFDLSTEEYQQDLPTIGGKLFVDDGKTHITIKG
ESFTYRFNKDAGSIDYIDLLGNIILNKSIEFNLYRAPTDNDMYSKKAWIEDGFNRTNPYT
YDITVSEVENGIAIHCPLSIQAVYLANLCEIESVWTVYNSGAINVTLDVKARDNMSYLPR
FGLQLMLDESLSNCSFFGYGPHECYVDKHTSTYKDMFQSAVPNMHEDYIFPQENGSHYDS
EYVCLTSDKAKVEINSCNNHFSFNVSPYTIEELANKTHNYLLEKSGYTVLNIDYKMSGVG
SNSCGPELEPEYRLSEKKFKFEVNIIPTLK
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atgctaagaaactactaccaagatttaaatgtgctaaacgtgaatacaattcctaacaga
gcttattatattccatcaaagccaggtaacatttctgatcaaaagacaaataatgattca
gttatgttattaaatggagattggaaattcaagttttataaaaaggttcaagattttact
ttcgatattgatcaatatgacacgattcctgtaccctcaaactggcaaatgcatggatac
gacgcacatcaatatacaaatgtacgctaccctattccctacaatcccccatatgttcca
aaagagaatccttgcggactatatgaaagaacaatttcaattaaagacaaagaaagcaat
cgctttttcttaaactttgagggtgtggattcttgccattacgtatacataaatgatcaa
tttgttggctactcacaagtatcccactcaacaagtgaatttgatattacgaattttatt
caaaatggtgacaacaaattacaagttgtcgttttaaaatggtgtgatggcacctattta
gaggaccaagataaattaagaatgagtggtatctttcgtgacgtttacgttttagttaga
ccaaaagaatttctttttgactatcagattaaaacaaatatcacttctgataatacagca
actgtttgtattactatgaatgatcatgaaacaaagctacagaaaaaaattattttggct
gatacaaatcatactattatcagcgaattatcaacctctgaatgcaaagctgatattatt
gtaaacaatccaatcctatggactgccgaaagcccatatttgtattatattaccttcgaa
acagaaaatgaagtaattaccgatactgttggtattcgtacaattgctatcgaaaatagt
attgttaaagtgaatggaaaacaagtaaaatttaaaggtgttaacagacatgatagctat
tgtgatacaggatacgttgcttctttagaacgaatcacagctgatttaaaactaatgaaa
cagcataacatcaacgctattcgtacatctcattatccaaacaggccagaattatataaa
ctatgtgaccaatatggtttttatgttattgatgaagcggatattgaagctcacggtacc
attacaatggcaaaccctgcaaatcatgatttatatgctgatattgcaaataatcctaaa
tggactaacgctattgttgaccgcattgaaaagcttgtacaacgagataaaaacagacca
tgcgttatcttttggtcattaggcaatgaaagtggatatggatgttgtttcagagaagcc
ggtaaacgtgttaaggaaatggatgataccagaattgttcactacgagtctatggttatt
ccggaagctgaaaaggcaaaaggcacagaaaaattcgaagttatcgatgttgtgagccat
atgtacccttcattatcttggctagaaaatgatttcataggaaatcctaacgagaatcgt
ccacgtattctctgtgaatttgctcatgcaatgggaaatggacctggagatttgaatcgt
tactatgatttgatatataaatatgataacttctgcggtgcttttgtttgggaatggtgt
gatcacaccgttttagttggcgaaaagaacggcaagtctatgtaccactatggtggcgat
ttcggagaattcccacatgacggaaacttctgtatggatggattggtttatccagatcga
aaacctcatacaggtttattggaattgaaaaatgctgcacgccctgcacatattcattat
aaaaatggtaaatttcaaattgaaaacaaacttgactttacaaatctaaacgatattctt
tatctacaatggacaattaagcaaaatggaaatgtaattcaatccggcgaaattcgtgca
ttggatgttaacccacatgaaactacggaacttcctatagaattgcaacaattaagtggt
ggtcgtgtctatataaagtttgatatgatttctataaacgagactccgttagtagaagct
ggttccgttctcggttttgaacaatttgatttatctacagaagaataccaacaagactta
cctactatcggtggcaaactatttgttgatgatggtaaaactcatatcactattaaagga
gaaagttttacctaccgatttaataaagatgcaggcagcattgattatattgatctatta
ggcaatattattttaaataaatccattgaatttaatctttatagagccccaacagataac
gatatgtatagcaaaaaagcatggattgaagatggcttcaatcgtacaaacccatatact
tatgatattacagtatctgaagtagaaaatggtatcgctattcactgccctctttctatt
caagcagtatacttagcaaatctttgtgaaattgaatctgtatggactgtatataacagc
ggtgctattaacgttactttagatgtaaaagcaagagacaatatgtcatacttaccacgt
ttcggtttacagctcatgttagatgaatctttaagtaattgcagtttctttggatatgga
cctcatgaatgctatgttgataaacataccagtacatataaagatatgttccaatccgca
gtaccgaatatgcatgaagactatatcttccctcaagaaaatggttcacattatgatagt
gaatatgtatgcttaacatctgataaagcaaaagtcgaaattaactcttgtaataatcat
ttcagcttcaatgtttccccatatactattgaggaattagccaacaaaacacataactac
ttattagaaaaaagcggatatactgttttaaatattgactacaaaatgtccggtgtcggt
tctaacagctgtggtcctgagcttgagccagaatatcgtttgagtgaaaaaaaattcaaa
tttgaagttaatatcattcccactttgaagtaa
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