KEGG   Paludihabitans sp. MB14-C6: RBG61_00770
Entry
RBG61_00770       CDS       T09321                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
palm  Paludihabitans sp. MB14-C6
Pathway
palm00300  Lysine biosynthesis
palm00470  D-Amino acid metabolism
palm01100  Metabolic pathways
palm01110  Biosynthesis of secondary metabolites
palm01120  Microbial metabolism in diverse environments
palm01230  Biosynthesis of amino acids
Module
palm_M00527  Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:palm00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    RBG61_00770 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    RBG61_00770 (dapF)
Enzymes [BR:palm01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     RBG61_00770 (dapF)
SSDB
Motif
Pfam: DAP_epimerase PhzC-PhzF Pro_racemase
Other DBs
NCBI-ProteinID: WMJ23220
LinkDB
Position
175519..176376
AA seq 285 aa
MELKFTKMQGCGNDYIYINCIENAATNNMKINSPESLSVLLSDRHFGVGGDGIVLILSSD
IADAKMRMFNIDGSEGKMCGNAIRCVAKYLYDNNIVNKETLTVETLAGVKKLFLTIQNGA
VSSVKVNMGNAELSPDKIPVKMQGDSIVNRQVNINNIDYAITCVSMGNPHAVVFCDDVDY
INLAEIGPLFENNSLFPERINTEFVEIVDENNFKMRVWERGSGETLACGTGACASAVAAV
LNGYCDKNTDIKVQLLGGDLVIRYTDDAVYMTGGCKKVFDGVIEI
NT seq 858 nt   +upstreamnt  +downstreamnt
atggaattaaaatttacgaaaatgcaaggatgcggtaatgactatatttatattaactgt
atcgagaatgctgcgacaaacaatatgaaaataaactcacctgaatctttgtcggtactt
ttatccgatcgacattttggtgtgggtggtgatggtattgtattaattttatcttctgat
atcgccgatgctaaaatgaggatgtttaatattgacggaagcgaaggtaaaatgtgtgga
aatgcaattcgttgtgttgctaagtatttatatgataataatatagtaaataaagaaaca
ttaacggttgaaacactcgctggtgttaaaaaattgtttttaactatacaaaatggagct
gtttcatctgttaaagttaatatggggaatgcagaactttctcccgataaaattcctgtt
aagatgcaaggggatagcatagtaaataggcaagttaatatcaataatattgattatgct
atcacttgcgtatctatgggaaatcctcatgcagttgtattttgcgatgatgttgattat
ataaatcttgctgaaatagggccattatttgaaaataattcgttgtttccggaaagaata
aataccgaattcgtcgaaattgttgatgaaaataatttcaaaatgcgtgtatgggaaagg
ggaagtggtgaaactcttgcttgcggtacaggtgcttgtgcttcagcagtagcagctgtt
ttaaatggttattgtgataaaaacacagatattaaagtccaactccttggtggcgatctt
gttatacgttatactgacgatgcagtgtatatgaccggaggatgtaaaaaagtttttgat
ggagtgatagaaatatga

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