Paludihabitans sp. MB14-C6: RBG61_01130
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Entry
RBG61_01130 CDS
T09321
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
palm
Paludihabitans sp. MB14-C6
Pathway
palm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
palm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
RBG61_01130 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
palm03400
]
RBG61_01130 (ruvB)
Enzymes [BR:
palm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RBG61_01130 (ruvB)
DNA repair and recombination proteins [BR:
palm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
RBG61_01130 (ruvB)
RecFOR pathway proteins
RBG61_01130 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
Mg_chelatase
AAA_16
TIP49
DUF815
AAA_14
nSTAND3
Sigma54_activ_2
AAA_3
AAA_18
TsaE
NB-ARC
Bac_DnaA
RNA_helicase
AAA_2
AAA_24
NTPase_1
NPHP3_N
AAA_17
KAP_NTPase
Resolvase
AAA_28
Motif
Other DBs
NCBI-ProteinID:
WMJ23292
LinkDB
All DBs
Position
264334..265377
Genome browser
AA seq
347 aa
AA seq
DB search
MFDQNNDLDLESRLITPDFASEDVDVEFSLRPKTLNEYIGQDKAKENLSIYIEAAKTRNE
ALDHVLLYGPPGLGKTTLSGIIANEMNVNLRITSGPAIEKPGDLAALLTNLSPNDVLFID
EIHRLSRAVEEVLYPAMEDYALDIIIGKGPSARSIRIDLPKFTLIGATTRAGQLTSPLRD
RFGVMLRLELYTDEQLAEIILRSANILDIPCVKDGALELAKRSRGTPRIANRLLKRVRDF
AQVLGDGTISKEMVNIALNKLEIDELGLDTIDRRMLSMIINHYNGGPVGLETLAAALGEE
SVTLEDVYEPYLMQLGFLSRTPRGRCATIKAYEHLGITKDETQLSFK
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaccaaaataacgatttagatctagaaagccgcttaataactcctgattttgct
tcagaagatgttgatgttgaattttctttacgaccaaagaccttaaatgaatatattggg
caagataaagcaaaagaaaacttgtctatttatattgaggctgcaaaaactcggaatgaa
gcgttggaccatgttttattatatggaccaccgggcttgggtaaaacaacactatcagga
attatcgcaaatgaaatgaatgtaaatttgcgaataacttctggcccagcaattgaaaag
ccgggtgatttagcagctttgttaaccaatttaagtcccaatgatgttttgttcattgac
gaaattcatcgtttgtcacgtgcagtcgaagaagtgctgtatcctgctatggaagattat
gcacttgatattattataggaaaaggtccgtcagcacgttcaatacgaattgatttaccg
aagtttactttaattggggcaactactcgagcaggacaacttacatcacctttacgtgac
cgttttggtgtaatgctgcgattagaattatatacggatgaacaactcgcagagattatt
ttgcgaagcgcaaacattctagatattccatgtgtaaaagatggtgcgttggaattagca
aagcgttcaagaggcacgcctcgtattgcaaatagattattaaaacgtgttcgagatttt
gcacaagtcttaggcgatggaacaatttcaaaagaaatggtgaatattgcgttaaacaaa
cttgaaattgatgaattaggcttagatacgattgatagacgtatgttatctatgattatt
aatcattataatggtggcccggttggattagaaaccttggctgcggcattaggtgaagaa
tcagtaaccttagaagatgtttatgaaccatatttaatgcagttaggttttttaagcaga
actccaagaggaagatgtgcaaccataaaagcatatgaacatttaggaattacaaaagat
gaaacacagctttcatttaaataa
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