Paludihabitans sp. MB14-C6: RBG61_02500
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Entry
RBG61_02500 CDS
T09321
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
palm
Paludihabitans sp. MB14-C6
Pathway
palm00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
palm00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
RBG61_02500 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
palm01007
]
RBG61_02500 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
palm03016
]
RBG61_02500 (lysS)
Enzymes [BR:
palm01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
RBG61_02500 (lysS)
Amino acid related enzymes [BR:
palm01007
]
Aminoacyl-tRNA synthetase
Class II (A)
RBG61_02500 (lysS)
Transfer RNA biogenesis [BR:
palm03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
RBG61_02500 (lysS)
Prokaryotic type
Other AARSs
RBG61_02500 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
DUF1980_C
Motif
Other DBs
NCBI-ProteinID:
WMJ23563
LinkDB
All DBs
Position
complement(535344..536843)
Genome browser
AA seq
499 aa
AA seq
DB search
MNDNNTVENNAVEDLGDLLKVRREKLKDLCERNLNPYEVTVYDQTAFAQVITDNFDEYEG
KEVSIAGRIMSKRDMGKASFIDIQDTTGRIQSYVRKDHVGDDSYVDFKKYDIGDIIGIRG
EVFRTQKGQISVKASAVKLLSKSLLPLPEKFHGLKDMDLRYRQRYIDLIVNPEVKDTFIK
RSKIIKEIRNYLDDNNFLEVETPVLQTVAGGAAARPFNTHHNTLDLDMHLRISLELYLKR
LIVGGFDRVYEIGRVFRNEGMSVRHNPEFTLLELYQAYTDYEGMMNLTENLIKHVADKVI
GTKVVQYGEYEIDLEKPFERLTMIEAVKKYANVDFSTIETVEQAKALAQEHHIEFEDRHM
KGDILNLFFEEYVEEHLIQPTFIMEHPVEISPLAKRKPTDPGYTERFELFILGREHANAF
SELNDPIDQRERFVHQVELKNAGDDEASDMDEDFLNALEYGMPPTGGLGIGIDRLVMLLT
NNNTIRDVLLFPTMKPEIK
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacaataatacagttgaaaataatgcagtggaggatttaggtgatcttttaaaa
gttcgtagagaaaagttaaaagatttatgtgaaagaaacttaaatccatacgaagtaact
gtatatgatcaaactgcttttgcgcaagtaattacagataattttgatgaatatgaaggc
aaagaagtatctatcgccggtcgtattatgagcaaacgtgatatgggtaaagctagcttt
attgatattcaagatacaacaggcagaattcaatcctatgtaagaaaagaccacgttggt
gatgattcttatgtagattttaagaagtatgatattggcgacattattggtattcgtggt
gaagtattccgaacacaaaaaggacaaatatcagtaaaagcaagcgcagtaaaattatta
tctaaatcattattgcctttacctgagaaattccatggcttaaaggatatggatttgcgt
tatcgtcaacgttatattgatttaattgtaaatcctgaggtgaaagatacctttatcaag
cgtagtaagattatcaaagaaattagaaactatttagatgataataatttcttggaggtt
gaaactccggtattacaaacggttgctggtggtgccgctgcaagaccattcaatacacat
cataatacccttgatttagacatgcatcttcgtatttcacttgaattatatctaaaacgc
ttaatcgttggcggatttgatcgagtttatgaaataggcagagtatttagaaatgaaggc
atgtctgttcgtcataaccctgaatttaccttattggaattatatcaggcatataccgat
tatgaaggcatgatgaatttaacagaaaatctaatcaagcatgtagctgataaagttatc
ggtacgaaagttgttcaatacggagaatatgaaattgatttagaaaaaccatttgagcgt
ttaaccatgattgaagcagtaaaaaaatatgcaaatgttgatttttctacaattgaaaca
gtagaacaagcgaaagcattggcacaagaacatcatatcgaatttgaagatcgccatatg
aaaggtgatattttaaatctgttctttgaggaatatgttgaagaacacttaatccaacca
acctttattatggaacatcctgttgaaatttcacctcttgctaagagaaaaccaaccgat
cctggctatacagagcgttttgagttgtttattttaggtagagaacatgcgaatgctttc
tcagagttgaacgatccaattgaccaaagagaacgttttgttcatcaagttgagttgaaa
aatgcaggcgatgatgaagcatctgatatggatgaagatttcttaaatgcattagaatat
ggtatgcctccaacaggtggtttgggtattggtattgaccgtctggttatgttattaaca
aataacaatacaattcgtgatgtattattgttcccaacaatgaaaccggagattaagtag
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