Paludicola sp. MB14-C6: RBG61_02540
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Entry
RBG61_02540 CDS
T09321
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
palm
Paludicola sp. MB14-C6
Pathway
palm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
palm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RBG61_02540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
palm03400
]
RBG61_02540
Enzymes [BR:
palm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
RBG61_02540
DNA repair and recombination proteins [BR:
palm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
RBG61_02540
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
WMJ23571
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All DBs
Position
544284..545039
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AA seq
251 aa
AA seq
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MELISWNVNGLRACLTKGFLDFCYTMNADIFCIQETKLQEGQVELELDGYEQYWNSAIKK
GYSGTAVFTKAKPISVSYDIGREEHSGEGRVITLEYDSFYLVNVYTPNAQRGLARLDYRM
QWEDAFREYLLKLNQTKPVIMCGDLNVAHNEIDLKNPKSNRQNAGFSDEERGKMTELLDS
GFVDSFRYLYPDVTGAYSWWSYMYNARANNAGWRIDYFVVSEQLKDKIKEASIHSNIMGS
DHCPVSLEIAL
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atggagttaatatcatggaacgtaaatggactaagggcttgcttaacaaaaggcttttta
gacttttgttatacaatgaatgcagatatattttgtattcaagaaacaaaattacaggaa
ggacaagtggaattagaactggatggttatgagcaatattggaatagtgctattaaaaaa
ggatattcaggcactgctgtttttacaaaggcaaaaccaatatcagtgtcttatgatatc
ggcagagaggagcatagtggcgaaggcagagtaattacacttgaatatgattccttttat
cttgtaaatgtttatacgccgaatgcacaacgtgggttagctcgacttgactatcgtatg
caatgggaagatgcatttcgggaatacctgttgaaactaaaccaaacaaaacctgtaatt
atgtgcggtgatttgaatgttgctcataatgaaattgacttaaaaaatccgaagtcaaat
cgtcagaatgcaggtttctctgatgaagaacgtggtaaaatgactgaactattagattca
ggctttgtcgacagtttccgttatttatatcctgatgtaacgggtgcttattcttggtgg
tcttatatgtataatgcaagagcaaacaatgcaggatggagaatagactatttcgttgta
agcgagcaactaaaggataaaatcaaagaagcaagtattcatagcaatattatgggtagt
gaccattgccctgtttcgcttgaaattgctttatag
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