Paludihabitans sp. MB14-C6: RBG61_03075
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Entry
RBG61_03075 CDS
T09321
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
palm
Paludihabitans sp. MB14-C6
Brite
KEGG Orthology (KO) [BR:
palm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
palm03032
]
RBG61_03075
03036 Chromosome and associated proteins [BR:
palm03036
]
RBG61_03075
03400 DNA repair and recombination proteins [BR:
palm03400
]
RBG61_03075
DNA replication proteins [BR:
palm03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
RBG61_03075
Chromosome and associated proteins [BR:
palm03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
RBG61_03075
DNA repair and recombination proteins [BR:
palm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
RBG61_03075
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-CCDC81_euk_2
HU-HIG
HU-CCDC81_bac_2
DUF2267
Motif
Other DBs
NCBI-ProteinID:
WMJ23664
LinkDB
All DBs
Position
complement(647645..647917)
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AA seq
90 aa
AA seq
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MTKVELIAAVAEKAELSKKDAEKAVNATIQAITEGLKNDSKVQLVGFGTFEVRTRAAREG
KNPATGEKIKIAASKVPAFKAGKGLKEYVK
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaagttgaactaattgctgctgttgcagaaaaagctgaattatctaaaaaagat
gctgaaaaagcagtaaatgctactatccaagctattacagagggtttgaaaaacgactct
aaagttcaattagttggttttggtacttttgaagttcgtactcgtgcagctcgtgaaggt
aaaaatcctgctactggcgaaaagattaaaattgctgcttctaaagttccagcattcaaa
gctggcaaaggcttaaaagaatacgttaaataa
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