KEGG   Paludihabitans sp. MB14-C6: RBG61_03075
Entry
RBG61_03075       CDS       T09321                                 
Name
(GenBank) HU family DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
palm  Paludihabitans sp. MB14-C6
Brite
KEGG Orthology (KO) [BR:palm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:palm03032]
    RBG61_03075
   03036 Chromosome and associated proteins [BR:palm03036]
    RBG61_03075
   03400 DNA repair and recombination proteins [BR:palm03400]
    RBG61_03075
DNA replication proteins [BR:palm03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    RBG61_03075
Chromosome and associated proteins [BR:palm03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    RBG61_03075
DNA repair and recombination proteins [BR:palm03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      RBG61_03075
SSDB
Motif
Pfam: Bac_DNA_binding HU-CCDC81_euk_2 HU-HIG HU-CCDC81_bac_2 DUF2267
Other DBs
NCBI-ProteinID: WMJ23664
LinkDB
Position
complement(647645..647917)
AA seq 90 aa
MTKVELIAAVAEKAELSKKDAEKAVNATIQAITEGLKNDSKVQLVGFGTFEVRTRAAREG
KNPATGEKIKIAASKVPAFKAGKGLKEYVK
NT seq 273 nt   +upstreamnt  +downstreamnt
atgacaaaagttgaactaattgctgctgttgcagaaaaagctgaattatctaaaaaagat
gctgaaaaagcagtaaatgctactatccaagctattacagagggtttgaaaaacgactct
aaagttcaattagttggttttggtacttttgaagttcgtactcgtgcagctcgtgaaggt
aaaaatcctgctactggcgaaaagattaaaattgctgcttctaaagttccagcattcaaa
gctggcaaaggcttaaaagaatacgttaaataa

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