Paludicola sp. MB14-C6: RBG61_03170
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Entry
RBG61_03170 CDS
T09321
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
palm
Paludicola sp. MB14-C6
Brite
KEGG Orthology (KO) [BR:
palm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
palm03036
]
RBG61_03170 (smc)
Chromosome and associated proteins [BR:
palm03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
RBG61_03170 (smc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_15
AAA_23
AAA_29
BLOC1_2
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
WMJ23683
UniProt:
A0AA51GYH2
LinkDB
All DBs
Position
complement(663374..666952)
Genome browser
AA seq
1192 aa
AA seq
DB search
MLLKYLDIQGFKSFPDKTRITFDKGLTAVVGPNGSGKSNISDAVRWVMGEQSTKTLRGAK
MEDVIFAGTKTRKSQGFCEVSLTVDNHNREFAIDSDEVTITRKYYRSGESEYLINKSNVR
LKDINEIFMDTGLGKDGYSLVGQGKIAEIVQSKSKERREIFEEAAGISKFRYRKNEAERN
LSNAEDNLVRLRDILSELEGRIEPLKEQSEKAKKFLDLSNHKKTLEVSIWNDMMERSNQL
LKDQSDKIVISTNKREELEEQIKEIEDKIQSTFQEMQQCMIDIENKRHQKDELEVVISQL
TSQIAVCQNDIHHNEQNAARIDSEIENFEIAMQNVNNEINDKEDQIVAINKQIADLEQEI
ESKQEELLHQSDENENLNKKQHELSNEVNKLLLEQSQMKMTIAQLSMNSSELTASVESNE
TELKTRKQELESYIKEQASANEFMHDLNDRLESLSNTISGHKIKLENRSMKLNAVKQECE
KSDLAIKEKQQKVKLLESLEHNLEGFAYSVKEILKRSKNGILHGVLGTVSQIIDVKSEYS
VAIETALSSSMQNIVVENESHAKAAIRMLQQQNLGRATFLPITSVSGSTLNVDNLEQYAG
FVDLASNLISYDSKYKNIIESLLGRVVIVDDIDTAVLIAQKNGYKFRIVTLDGQVVNAGG
SLSGGSRNKSQGFLSRKNEIQELTNEIRILQEKHQEHMKLMHTLQAEVGQIEAEYHAITS
EMQTVNEDKIRIESELKRLGLMMNQIEALSKQMETELKLKQEKLQQNKVESNQCQQNLTA
IESKVIEISSVLNTIQASSQGSTEHQTHLADELSQMKIQSVELKKDIEAILLSIEELKKH
NQATNSSTAKLQEDKNILLSKNDDIQLQIENYKVDIEHNKSNITLLNEEISAVTLKRQQL
EGSTTTLRKEERSFSEQKEKMASEIVRLEERHLAMQREYDEIISKLWEEYELTRSEAQSI
AIKLENIPKATTELNSVKSKIRSLGTVNVAAIEEYKEVSERYEFLNSQVKDAEKSRNELI
RLIGELTQKMQDIFGENFKKINYQFQRIFVELFGGGKAELKLTEPDNLLESGIEIFVEPP
GKIIKNLASLSGGEQSFVAIAIYFAILKVRPAPFCILDEIEAALDDVNVVKYANYLNQMT
DKTQFIMITHRRGSMEAADILYGVTMQEEGVSKLLQLNVTDIENNKILNGVN
NT seq
3579 nt
NT seq
+upstream
nt +downstream
nt
ttgctattaaagtatttggatattcagggattcaaatcatttcccgataaaacaagaatt
actttcgacaaaggattaactgcggtagtcggaccaaatggaagtggaaaaagcaatatt
agtgatgctgtacgttgggtaatgggtgaacaatcaaccaaaacgctgcgtggtgcaaaa
atggaagatgttatttttgcaggaacgaaaacaagaaaatcgcaaggcttttgtgaagtt
tctttaactgtggataaccataatcgtgaatttgcgattgacagtgatgaagtaaccatt
acaagaaaatattatcgttccggtgaaagcgaatatttaatcaataaaagtaatgttcga
ttaaaagatattaacgagatttttatggataccggtcttggtaaagacggatattcatta
gttggacaaggtaaaatagcagaaattgtgcaatccaaaagcaaagaaagacgagaaata
tttgaagaagctgcgggtatttcaaaattccgttatcgtaaaaatgaagcagagcgaaat
ttatcgaatgcagaggataaccttgttcgtttaagagatattttaagcgaattagaagga
agaattgagccgctaaaagagcaatctgaaaaagcaaagaagtttttagatttatcgaat
cacaaaaaaaccttagaggtttctatttggaacgacatgatggagcgttctaatcagttg
ttaaaagaccaatctgataaaattgttatttctacaaataaacgagaagaattagaagaa
caaattaaagaaattgaagataaaattcaatctacatttcaagaaatgcaacaatgtatg
attgatattgaaaataaacgtcatcaaaaggatgaattagaggttgttatttcacagctt
acttctcaaattgctgtttgtcaaaatgatattcaccataacgaacaaaacgctgctcgt
attgatagtgaaattgaaaattttgaaattgcaatgcaaaatgtgaataatgagattaac
gataaagaagatcaaattgttgcaattaataaacagattgctgatttagagcaagaaatt
gaaagcaaacaagaagaattgttacatcaatccgacgagaatgaaaacttaaataaaaag
cagcatgaactttctaatgaagtaaataagctattattagagcaatctcaaatgaagatg
acaattgcacagctgtcaatgaattcttcagaattgactgctagtgttgagtcgaatgaa
acagagcttaaaacaagaaaacaagaactggaaagttacataaaagagcaagcatctgct
aacgagtttatgcacgatttgaatgatagacttgagagcctgtctaatactataagcggc
cataaaatcaagttggaaaaccgcagtatgaaactgaatgctgtaaaacaagaatgtgag
aaatcagatttagctatcaaagaaaagcaacaaaaagtgaagcttttagagagtttggaa
cataacctagagggttttgcttatagtgttaaagaaattctcaagcgatctaaaaatggc
atattacatggcgttttgggaacagtatcgcaaattattgatgttaaatccgaatattcc
gtagcaattgaaactgctttaagctcatctatgcaaaatatcgttgtagaaaatgaatcc
catgcgaaagccgcaattcgaatgttacagcagcaaaacctaggccgtgcaacattccta
cctataacgtctgttagcggatcaaccttaaatgttgacaacttggagcaatatgcagga
tttgttgatttagcgtctaatttaatttcttatgatagtaaatataaaaatatcattgaa
tcattattaggcagagtagttatcgtagatgatattgataccgctgttttaattgcacaa
aaaaatggttataagtttcgcatcgtgactttagatggtcaagttgtaaatgcaggtggt
tcattatccggtggttctcgtaataaaagtcaaggattcttgagccgtaagaatgaaata
caagaattaacgaatgaaattcgcattttacaagaaaagcatcaagaacatatgaagctt
atgcatacgttacaagctgaagtgggacaaattgaagcagaatatcatgcaattacaagt
gaaatgcaaacggtaaatgaggataaaattcgaattgaatctgagctgaaacgtttaggt
ttaatgatgaaccaaattgaagcgttgagcaagcaaatggaaaccgaattaaagctgaaa
caagagaagctacagcaaaataaggttgaatccaatcaatgtcaacaaaacttaacagct
attgaatcaaaagtaattgaaataagctctgttttaaatacgattcaagcatcttctcaa
ggttcaactgaacatcaaactcatttagcagatgaattatcacaaatgaaaattcaatca
gttgagttgaaaaaagatattgaagctattttgttgtcaattgaagaattaaaaaaacat
aatcaagcgacgaattcatcaacagctaaattacaagaagataaaaatattttgttaagc
aaaaatgatgatattcaattgcaaattgaaaattataaagtggatattgagcataataaa
tctaatatcacattattaaatgaagaaatatctgctgtaactttaaaacgccaacaactt
gaaggaagtacaacaactttgcgtaaagaggaacgtagcttttctgaacaaaaagaaaaa
atggcttctgaaattgtacgtttagaagaacgtcatcttgcaatgcaacgtgaatatgat
gaaattatttctaagctttgggaagaatatgagttaacaagaagtgaagcacaaagtatt
gcaataaagctagaaaatattccaaaagccacaacagaattgaattctgttaaatcgaaa
atacgttctttaggaacagttaatgttgctgctattgaagagtacaaagaagtaagcgag
cgttatgagtttctaaatagtcaagtaaaagatgcagaaaagtcacgaaatgagttaatt
cgtttaattggcgagctgacacaaaaaatgcaagatatctttggcgaaaattttaaaaag
attaattatcaattccaacgtatatttgttgagttatttggcggtggtaaagcggaatta
aaattaaccgagccggacaatttgttagaatcaggaattgaaatttttgttgaaccaccg
ggaaagattatcaaaaacttagcttctttatcaggtggagagcaatctttcgttgcgatt
gcgatttattttgcaattctaaaagtaaggccagctccattttgtattttggatgagatt
gaagcggcgttagatgatgtaaacgtagtaaaatatgcaaattatcttaaccaaatgact
gataaaacgcaatttattatgattactcaccgtcgtggttctatggaagccgctgatatt
ttatatggtgttacaatgcaagaagaaggagtttcaaaattattgcaactcaatgttaca
gatatagaaaacaataaaatcttaaacggggtgaattaa
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