Paludihabitans sp. MB14-C6: RBG61_03505
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Entry
RBG61_03505 CDS
T09321
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase family protein
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
palm
Paludihabitans sp. MB14-C6
Pathway
palm00550
Peptidoglycan biosynthesis
palm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
palm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RBG61_03505
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
palm01002
]
RBG61_03505
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
palm01011
]
RBG61_03505
Enzymes [BR:
palm01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
RBG61_03505
Peptidases and inhibitors [BR:
palm01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
RBG61_03505
Peptidoglycan biosynthesis and degradation proteins [BR:
palm01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
RBG61_03505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Beta-lactamase2
Peptidase_S13
Glucos_trans_II
Shikimate_dh_N
Motif
Other DBs
NCBI-ProteinID:
WMJ23741
LinkDB
All DBs
Position
737826..739184
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AA seq
452 aa
AA seq
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MEILKKIISLSITMIIVFTLFASSTVEAAYKLPFETNSKAIYMVNTDTNTVVYEKNKDEK
IIPASLTKIMTTIIALETVKDLEGTIVTAPSYIYDEFFGLNVSTADIRQKEQVRMIDLLY
AMILPSANEAASIVADYIGDGSIAQFVDMMNKKAKEIGAKNTVFKNPHGLMAQGQVTTAY
DLYLITKYALSLPMFEKICTTTSYQMPATNKHSQPYNISHTNYMLSKVRGGSYYYPYAKG
IKTGTLPEVGKNLISMASKDGYNYLLISLGAPEVDSSGKPLGKNGAFEDAQNLYKWALTS
FKHQTIIKEGEVIEEAKVRLSSGQDYVSLLAKNDVTALLPSDVDATAIQKIPTILKDVRA
PVKKGDVLGRLDLKLNDEIIQSVDLVAYQDIHRSLWKYSFDLVKRFLNNTIVRVLLIILL
LLVLIFLVLKARYRKLQRLRAARSRYIRKMQK
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atggaaatattaaaaaaaataatttctttatcaataactatgattattgtattcacactt
tttgcttcatctactgtagaagcggcttataaattgccttttgaaacaaacagtaaagca
atatatatggtaaacacagatacgaatacagtagtttacgaaaaaaacaaagatgagaaa
attataccggcatcgcttactaaaataatgacgactattattgcacttgaaacagttaag
gacttagaaggtacgattgtaactgcaccttcttatatatatgatgaattttttggtctg
aatgtttctactgctgatattcgtcaaaaggaacaagttcgtatgattgatttgctgtat
gcaatgatattaccatccgctaacgaagccgctagcattgttgcggattatatcggtgat
ggtagtattgctcaatttgtagatatgatgaacaaaaaggcaaaagaaatcggtgctaaa
aatactgtttttaaaaatccacacggtctcatggctcaaggacaagttacaactgcatat
gatttatatcttattacaaaatatgcgttaagcttaccaatgtttgaaaaaatatgtact
actacttcttaccaaatgccagcaacaaataagcatagtcaaccctataatattagtcat
acgaactatatgctaagtaaagttcggggtggaagttattattatccatatgcaaagggt
attaaaaccggtactcttcctgaagtcggaaaaaacctgatttctatggcttcaaaagat
ggatacaattatctactgatttcgctaggcgcacctgaagttgattccagcggaaaacca
cttggcaagaatggcgcttttgaggatgcacaaaacttatacaaatgggcattaacatct
tttaagcatcaaaccatcataaaagagggcgaagtcattgaagaggccaaagtaaggtta
agctctggacaagactatgtttctttactagctaaaaatgatgtgactgcgttacttcca
agtgatgttgatgctacagccattcaaaaaattccaaccatattaaaagatgttcgggct
cctgttaaaaaaggggatgtgcttggccgcttagatttgaaattaaacgatgaaatcata
caatccgttgatttagtcgcttatcaagatattcatcgcagcttatggaaatatagtttc
gatcttgtaaaacgctttttaaataatactatcgtcagagtactgttaatcattctttta
cttctcgttttaatcttccttgttttgaaagcaaggtatcgtaaactgcaacgcttacgt
gcggcaagatctcgttatataagaaaaatgcaaaaataa
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