Paludicola sp. MB14-C6: RBG61_03625
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Entry
RBG61_03625 CDS
T09321
Name
(GenBank) penicillin-binding transpeptidase domain-containing protein
KO
K08384
stage V sporulation protein D (sporulation-specific penicillin-binding protein)
Organism
palm
Paludicola sp. MB14-C6
Pathway
palm00550
Peptidoglycan biosynthesis
palm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
palm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RBG61_03625
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
palm01011
]
RBG61_03625
Peptidoglycan biosynthesis and degradation proteins [BR:
palm01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
RBG61_03625
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PASTA
Motif
Other DBs
NCBI-ProteinID:
WMJ23765
UniProt:
A0AA51CRB0
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All DBs
Position
complement(767925..770159)
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AA seq
744 aa
AA seq
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MSKLPTLKMKKRLNYVVITAFMLAFVIVIYNIVKITVFQYDYYSQKATQQQMRPSSIPAN
RGTIYDRNMQVVAQSATVWDVILSPVDIKGNLKTDAEIEQRRKDIAKQLSTILKIDEAKV
LEQTHKKNQYEIIKKKVEKPEADAIRALVNDRKRRWYCITLQENTKRYYPNSTFASSVIG
FTGSDAQGLYGLEQTYDKELKGIPGYIVTAKNGIGEDMPVSYEERFAPTNGNNLVLTIDE
TIQHFLEKSLTQVMKEHTPKKGAAGIVMNVNTGEILAMANMPNFDLNNPYYILDDTVRTE
VEKLPEDQQKDAKTKAQQAQWNNKAISYAYQPGSVFKTVVASAALEEKTSSLHSAFNCPG
YVKVGDRTMKCHKTTGHGSLDFTGAIVNSCNPSFVKIGSDLGSNLFYKYFKAFGLTEKTG
IDLPGEGTSLYYTADKLGAVSLASCSFGQSMALTPIQVVTAVSAVVNGGKLVTPHVVKDV
MDQNNNIVKTNDTIVKRQVISEETSKTMRGLMEEVVNAKGGTNASIKGYRIGGKSGTSQK
QTPGDDQNAYISSYVAVAPMENPQLAVYIMVDEATSGQYYGSVISAPVAARVLSDTLPYL
GYSPKFTEEEIANSEKVVPFVLEKGILEAQSALSAQGFTKAKVVGSGSNVVKQVPSSGSK
MPRDGTVILYTEDVAETTAKVPKVTDLTPSAAKALLESKKFNVLIKGLATGHQNSSITAQ
SIAPGTDAPIGTVVEITCLNINTE
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaattacctaccttgaaaatgaaaaagcgcctaaattatgtggtaataacagct
tttatgctggcgtttgtaattgtaatatacaatattgttaaaattacagtatttcaatat
gattattattctcaaaaggcaacgcaacaacaaatgcgcccatcttcgatccctgcaaat
aggggaactatctatgaccgcaacatgcaagtggttgcgcaaagtgcaactgtttgggat
gttattctttcgccggtagatattaaaggtaatttgaaaacggacgcggaaatagaacag
cgtaggaaagatattgcaaaacagctttctaccatcttaaaaatagatgaagcaaaggta
ttagaacaaacgcacaaaaagaatcaatatgaaataattaagaaaaaagttgaaaaacct
gaagcagacgcaattcgtgcacttgttaatgaccgtaaaagacgttggtattgcattact
ttgcaagaaaataccaaacgctactatccaaactcaacctttgcctcttcagtaattggt
tttacaggttctgatgcgcaaggattatatggattagagcaaacatatgataaagagtta
aagggaattccgggatacatagtaacagctaaaaatggtattggcgaagatatgcctgtt
agttatgaagaacgttttgcaccaactaacggtaataacctagtattgactattgatgaa
acgatacaacatttcttagaaaagtcattaacgcaagtaatgaaagaacatacgccgaaa
aaaggtgccgcaggaattgtaatgaatgttaatacaggcgaaattcttgcaatggcaaat
atgccgaatttcgacttaaataatccttattatattttagatgatacagtaagaacggaa
gtagaaaagctaccggaagatcagcaaaaagatgcaaagacaaaggcacagcaagcacaa
tggaataacaaggctatttcttatgcttatcaacctggatctgtatttaaaacagttgtg
gcttccgctgcactagaagaaaaaacatcttcattgcattctgcttttaattgtcccgga
tatgttaaagttggcgatagaacaatgaaatgtcataaaacaaccggtcatggatctttg
gactttacgggagcaatcgtaaactcttgtaacccatcattcgtaaaaatcggttcggat
ttaggctcaaatttattctataaatattttaaagcctttgggttaaccgaaaaaacagga
atcgatttacctggcgaaggaactagtctttactatactgccgataagcttggcgcagta
tcactggcaagctgctctttcggtcaatctatggcgttaacaccaattcaagtagttact
gctgtaagtgcagttgtgaatggtggtaaattggtaacacctcatgttgtgaaagatgtt
atggatcagaacaataatatcgtgaaaacaaacgatacgattgtaaaacgtcaagtaatc
agcgaagaaacatctaaaacaatgcgtggtcttatggaagaagtcgtaaacgcaaaaggc
ggaacgaacgcctctattaaaggctatcgtattggtggtaaatcaggtacttctcaaaag
caaactcctggtgatgatcaaaatgcgtatatttcttcctatgttgcagtagcaccaatg
gaaaatccacaattggcagtttatatcatggtagatgaagcaacttcaggtcaatattac
ggtagtgtaatttcagctccggttgctgctagagtattatctgatacattaccttatttg
ggttatagcccaaaattcacagaagaagaaattgcaaatagtgaaaaggttgttcctttt
gttttagaaaaaggaatattggaagcacaaagtgcattatctgcacaaggatttacaaaa
gcaaaagtggttggttcgggaagtaatgttgtaaaacaagttccaagctccggctcaaaa
atgccacgagacggaacagtgattttatatactgaggatgtcgcagaaacaacggcaaaa
gtaccaaaagtaactgaccttactccaagtgctgcaaaagcgttgctggaatccaaaaaa
ttcaacgttttaataaaaggtttggcgacaggtcaccaaaattcatctatcaccgcacaa
tcaatagcaccgggtacagatgcaccaattggtacagttgttgagattacatgtttaaat
attaataccgaatag
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