Paludihabitans sp. MB14-C6: RBG61_03725
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Entry
RBG61_03725 CDS
T09321
Name
(GenBank) valine--tRNA ligase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
palm
Paludihabitans sp. MB14-C6
Pathway
palm00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
palm00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
RBG61_03725
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
palm01007
]
RBG61_03725
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
palm03016
]
RBG61_03725
Enzymes [BR:
palm01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
RBG61_03725
Amino acid related enzymes [BR:
palm01007
]
Aminoacyl-tRNA synthetase
Class I (U)
RBG61_03725
Transfer RNA biogenesis [BR:
palm03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
RBG61_03725
Prokaryotic type
RBG61_03725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
tRNA-synt_1_2
Val_tRNA-synt_C
tRNA-synt_1e
RUBY_RBDX
DUF7130
zf-C2HC5
DUF6487
DZR
HypA
Seryl_tRNA_N
ABC_tran_CTD
Zn_ribbon_8
Motif
Other DBs
NCBI-ProteinID:
WMJ23784
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All DBs
Position
complement(788025..790643)
Genome browser
AA seq
872 aa
AA seq
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MKKELAKTYEPKEFEDRIYKYWLDCEYFKAKIDETKKPYTIVIPPPNITGQLHMGHALDN
TLQDILIRTKRMQGYSALWVPGTDHASIATEAKIVEAMKKEGISKEDIGRDGFLERAWKW
KEQYGGRIIEQLKKLGSSCDWSRERFTLDEGCSDAVKEVFIRLYEKDLIYRGERIINWCP
ECKTSISDAEVEYEDQEGSFWHLRYPIVGMNEYLELATTRPETLLGDTAVAVNPNDERYK
HLVGKKVILPLCNREIPIVADDYVDIDFGTGVVKITPAHDPNDFEVGLRHNLPIINVMTD
DAHMTDIVSKYAGMERYEARKAIVADLEAGGFLVKIEPHQHNVGACYRCHTTVEPRVSKQ
WFVRMEPLAKPANDAINNGTTKLIPERFDKTYFSWMNNIKDWCISRQLWWGHRIPAYYCQ
DCGEVMIAKEMPKACSKCGSSKLKQDEDTLDTWFSSALWPFSTLGWPNETEDLKYFYPTN
TLVTGYDIIFFWVARMIFSALEYTGQVPFDTVLFHGLVRDAQGRKMSKSLGNGIDPLEII
DEYGADALRLTLVTGNSPGNDMRFSDDKIKASRNFANKLWNATRFIMMNLSEDITEIKLP
ENLNIEDKWVLSQYNELVKQVTENIENYDLGVAVSKLYDFIWDIMCDWYIELTKARLQAG
GQTSLDAQQVLLYVMTNTIKLLHPFMPFITEEIWQALPTDCESIMVAKWPEYKEELCFTA
EEQEFAKVMDAIKGIRNARNEMNVPPSKKASVYIETEFEETFTCAKAFFERLTSASEVII
GREHNVESAVQVVTESAKIFIPLDDLIDKQKELERLNKEKAACEKDIAQLASKANNENFI
AKAPAKVVEEIKTKLAKAQELLAKIEDSINAL
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaagaattagcaaaaacttatgagccaaaagaattcgaagaccgaatttataaa
tattggcttgattgcgagtatttcaaagcaaaaattgatgaaacaaaaaagccatacacg
attgtaattccacctccaaacattacgggccaacttcacatgggccatgcattggataac
acattgcaagatatcttaattcgtacaaaacgtatgcagggctattctgcattatgggta
ccgggaacagaccacgcatccattgcaacagaagcgaaaatagttgaagcaatgaaaaaa
gaaggcatcagcaaagaagatatcggccgtgatggctttttagagcgtgcttggaaatgg
aaagaacaatacggcggaagaattattgagcaattgaaaaaacttggctcttcttgtgac
tggtcaagagagcgctttacgctagatgaaggctgctctgatgctgttaaagaagtattt
atccgtttatatgaaaaagatttaatctatcgtggcgagcgtattatcaactggtgtcct
gaatgtaaaacatctatttctgatgctgaagttgaatatgaagatcaagagggtagcttc
tggcatttacgttacccaatcgtaggaatgaatgagtatttagagttagcaactactcgt
ccggaaacattgcttggtgataccgcagtagcagtaaatccaaatgatgagcgttacaaa
cacctagttggaaaaaaagtaatattaccattatgtaatcgtgaaattccaatcgtagcc
gacgattatgttgatatcgattttggaactggtgttgttaaaattacaccggcacatgac
ccaaatgactttgaggttgggttacgccacaacttgccaattatcaatgttatgacagat
gatgcccatatgacagatatcgtttctaaatatgctggaatggaacgttatgaagcaaga
aaagcaatcgttgctgatttagaagcaggcggattcttggttaaaattgaaccacatcaa
cacaatgttggtgcttgctatcgttgccatacaacagttgagcctagagtatctaagcaa
tggttcgttcgtatggagcctttagcaaaacctgcaaatgatgcaattaacaatggtaca
acaaaattgattccagaacgctttgataaaacatattttagctggatgaataatatcaaa
gactggtgtatttctcgtcaattatggtggggacatcgaattcctgcttattattgtcaa
gattgcggcgaggtaatgattgcaaaagaaatgcccaaagcttgttcaaaatgtggttca
agcaaactgaaacaagatgaagatactttagatacatggttcagctctgcgttatggcct
ttctctactttaggttggccaaatgaaacagaagacttaaaatacttctacccaaccaat
acattggtaactggttatgatattattttcttctgggtagcaagaatgattttctcagca
cttgaatataccggtcaagttccgtttgatactgttttgttccacggattggttcgtgat
gcacaaggcagaaagatgtcaaaatccttaggaaacggtattgatccacttgaaatcatt
gacgaatatggtgctgatgcgcttcgtttaactttagtaacaggaaacagcccaggaaac
gatatgcgtttctctgatgataaaattaaagcaagccgtaactttgcgaataagctatgg
aatgcaactcgctttatcatgatgaacttatctgaagatattaccgaaattaaacttcct
gaaaacttaaatattgaagataagtgggtactttctcaatacaacgagcttgtaaaacaa
gtaactgaaaatatagaaaactatgatttaggtgttgcagtttctaagctatacgatttc
atttgggacattatgtgtgactggtatattgagcttacaaaagcaagattacaagctggt
ggtcaaacctctttggatgcacaacaagtattgctttatgtgatgaccaataccatcaaa
ttgcttcatccattcatgccatttatcacagaggaaatctggcaagcactacctaccgat
tgcgaaagtattatggttgcaaaatggcctgaatacaaagaagaattatgctttacagca
gaagaacaagaatttgcaaaggttatggatgcaatcaaaggcattcgtaatgccagaaat
gaaatgaatgttccaccaagcaaaaaagcgagcgtttatattgaaacagaatttgaagaa
accttcacttgtgcaaaagcattctttgagcgtttaacatctgcaagcgaagtgattata
ggacgtgagcataacgtagaatccgctgttcaagtagtaactgagtctgcaaaaatcttt
attccattagacgatttaattgataaacaaaaagaattagagcgtttaaataaagaaaaa
gcagcttgtgaaaaggatatcgcacaactagctagtaaagcaaacaatgaaaacttcatt
gcaaaagctcctgcaaaggttgttgaagaaattaaaacaaaactagcaaaagcacaagaa
ttactagcaaaaatcgaagatagtattaacgcattataa
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