KEGG   Paludihabitans sp. MB14-C6: RBG61_05455
Entry
RBG61_05455       CDS       T09321                                 
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
palm  Paludihabitans sp. MB14-C6
Pathway
palm00300  Lysine biosynthesis
palm00470  D-Amino acid metabolism
palm01100  Metabolic pathways
palm01110  Biosynthesis of secondary metabolites
palm01120  Microbial metabolism in diverse environments
palm01230  Biosynthesis of amino acids
Module
palm_M00526  Lysine biosynthesis, DAP dehydrogenase pathway, aspartate => lysine
palm_M00527  Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:palm00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    RBG61_05455
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    RBG61_05455
Enzymes [BR:palm01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     RBG61_05455
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC
Other DBs
NCBI-ProteinID: WMJ24111
LinkDB
Position
1154671..1155981
AA seq 436 aa
MSFLNHYSKIDSATIATVAKEYGTPVYLYDENTIREKCQMVLSMPNAFGLTVRYAMKANS
NRTLLQTIHQCGLCIDASSLNEVRRAHLAGIPYQDIILTTQEIPENDDRIDLEQMILQGL
KYNVCSLRQLYLIGDFAKANKINLSIRVHPGVGSGESASRNTGDNYSCFGIHLSDIGQAL
DFAKEKGILFTQVHVHIGSGADPLMWRQNIDLELDIIDRYFPDATTVSFGGGLKEARMPY
EIGADVNELGSYAKQQIEAFYQRTNRKLKMEIEPGTYIVANCGYAITKVIDKKRTGNDGF
NFIIANGGMEINARPIMYGSLHPFYMVSEHGKLLSSEFDINNIAQSDYEAVIVGRCCESG
DSQSLDDNDTSIPRKMIEPNVGDYFVIGGTGAYCSSMTPFNYNSHAQIPEVLFTSENTLQ
LIRKRQTLNQIVENEI
NT seq 1311 nt   +upstreamnt  +downstreamnt
atgtcattcttaaatcactatagcaaaattgactctgctacaatagcaactgttgcaaaa
gaatatggtactccagtatatttatatgatgaaaataccattcgagaaaaatgccaaatg
gtattatctatgccaaatgcatttggtttgacggttcgttatgcaatgaaagcaaactca
aatagaacactactacaaacaatccatcaatgtgggctttgcattgatgccagctcatta
aatgaggttcgccgtgcacaccttgcaggaattccctatcaagatattattttaacaact
caagaaattcctgaaaatgatgatagaattgatttagaacaaatgatacttcaaggcttg
aaatataatgtgtgttccctacgtcagctttatttgatcggagattttgcaaaagcaaac
aagattaacttatcgattcgtgtgcatccaggtgttggatcaggagagtccgcaagtaga
aacaccggagataactattcttgctttggaattcatctttctgatattggacaagctcta
gattttgctaaagaaaaaggtattctatttacacaggttcacgttcatattggctcagga
gctgatcctctcatgtggcgacagaatattgacttagaattagatattattgatcgatac
ttccccgatgccactacagtcagctttggagggggcttaaaagaagcacgtatgccatat
gaaatcggtgctgatgttaatgagcttggaagctatgcaaagcagcaaatagaagctttt
tatcaaagaaccaatcgtaaattaaaaatggaaatcgaaccaggaacctatatcgttgca
aactgcggctatgccattacaaaagtaatcgataaaaagcgtacgggcaacgacggattt
aacttcattattgccaacggtggtatggaaattaacgctcgtcctattatgtatggttca
ctacatccgttttatatggtttctgaacatggtaagcttttatcttctgaatttgatatc
aataatattgcacaatctgactatgaagctgtaattgttggcagatgctgtgaaagcggt
gattcccaaagcttagatgataacgatacgagtataccaagaaagatgatagagcctaat
gtcggcgattactttgtaatcggtggaacaggtgcatattgctcttctatgacaccattt
aattataattctcatgcgcaaattcctgaggttttgtttacttctgaaaatacgttacag
ttgattcgaaaaagacaaacactaaatcaaatagtggaaaacgaaatataa

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