Paludicola sp. MB14-C6: RBG61_06675 Help Entry RBG61_06675       CDS       T09321                                  Name (GenBank) RNA ligase family protein   KO K01971   bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] Organism palm  Paludicola sp. MB14-C6 Pathway palm03450   Non-homologous end-joining Brite KEGG Orthology (KO) [BR:palm00001]  09120 Genetic Information Processing   09124 Replication and repair    03450 Non-homologous end-joining     RBG61_06675  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:palm03400]     RBG61_06675 Enzymes [BR:palm01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      RBG61_06675 DNA repair and recombination proteins [BR:palm03400]  Prokaryotic type   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     Two-component NHEJ DNA repair complex      RBG61_06675 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_A_M DNA_ligase_A_C mRNA_cap_enzyme RNA_ligase Motif Other DBs NCBI-ProteinID:  WMJ24346 UniProt:  A0AA51CQL6 LinkDB All DBs Position complement(1386760..1387701) Genome browser AA seq 313 aa AA seqDB search MNLFESRNIKPMLIAENVEPFNSHEHVFELKLDGCRCIAYLDKDEVDLRNKRNVKLLPKF PELSNINKQIKKRCILDGELIVMVEGKPNFYELQRRTLMSNKFKIELAYKQHPACFIAYD ILYLDDRHITDLPLIERKKLLAKTINENGQIAISRYIEYNGIDLYKLTEHQKLEGIVAKL KDSRYYFGKRTHDWVKIKWLLDDDFVVCGYIEKESNMTSIVLGQYNKEGELTYKGHVTLG VRKNDLIKKGKTIDVSPFTFTPQGNENAIWLKPSLVCTVQWMPRENKGLNQAVFKGFRDD KPPHDCIVKDGRG NT seq 942 nt NT seq  +upstreamnt  +downstreamnt atgaatttattcgagtctcggaatataaagccaatgttaattgcagagaatgttgaacca tttaattcacatgagcacgtatttgagttaaagcttgatgggtgtcgatgtattgcatat ctagataaagatgaagttgacttaaggaataaaagaaacgttaagttgcttccaaaattt cctgaattgtcgaacattaacaagcaaataaaaaaacgctgcattttagacggtgagtta attgtaatggttgaagggaaacctaacttttatgaattacaaaggcgtacattaatgtcg aataagtttaagattgagttagcttataaacaacacccagcgtgctttatagcttacgat attttgtatttagatgatcggcatataacagatttaccattgatagagcgtaaaaaatta cttgctaaaactataaatgaaaatgggcaaattgcgatatcaagatatatcgaatataac ggcattgatttatataaactaactgaacaccaaaagcttgagggtatagtagctaaatta aaagacagtagatattattttggaaagaggactcatgattgggttaaaattaaatggcta ttagacgatgattttgtggtctgtggttacattgaaaaagaaagtaatatgacaagtatc gttttagggcaatacaataaagaaggagaattaacatataaaggtcatgttacattaggt gtgcgaaaaaatgatttaatcaaaaagggaaaaacaatagacgtttcaccttttaccttc acaccacaaggcaatgaaaatgcgatatggcttaagcctagcctagtttgcacagtacaa tggatgccaagagaaaataaaggattaaatcaagcagtatttaaaggttttcgagatgat aaaccaccacacgattgcattgttaaagacggtaggggatga

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