Paludihabitans sp. MB14-C6: RBG61_07410
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Entry
RBG61_07410 CDS
T09321
Name
(GenBank) Na+/H+ antiporter NhaC family protein
KO
K18218
tetracycline resistance efflux pump
Organism
palm
Paludihabitans sp. MB14-C6
Brite
KEGG Orthology (KO) [BR:
palm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
palm02000
]
RBG61_07410
01504 Antimicrobial resistance genes [BR:
palm01504
]
RBG61_07410
Transporters [BR:
palm02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
RBG61_07410
Antimicrobial resistance genes [BR:
palm01504
]
Gene variants
Tetracycline resistance genes
Transporters
RBG61_07410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Na_H_antiporter
Motif
Other DBs
NCBI-ProteinID:
WMJ21831
LinkDB
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Position
1529062..1530621
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AA seq
519 aa
AA seq
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MEALEAVNFGWMSILPPLIAIILALITKEVLSSLLVGVFAGALIYSGWNPIEMVTTTVKI
MGEKIGYNANILIFLGLLGAIVVVVTMAGGSRAYGAWASTKLKTRKGAAMATSALGVLIF
IDDYFNCLTVGTVMRPVTDKHRISRAKLAYILDATAAPVCIIAPISSWGASVASYMGEAG
VKNGMAAFLQTIPYNLYAICTVVMVAIICLSRINFGSMAKFEKIAIENGDVHAAKKQVET
ESFGGVEENKNGKVIDLVLPIGTLIVLTILAMLYTGGMFVGKGVTAFQAIGATDASLSLV
LGGIGTLIFTLVFYSIRKVLGFKDFMGAIATGVKSMVPAYLILILAWSIGGICSTEYLNV
GGFVGHWVNDANFPVFILPAVIFVVAGFLAFATGTSWGTMALLIPIGAAICITPDTQALL
IPIFGSILAGAVYGDHVSPISDTTILSSTGAGCNHMDHVSSQLPYATLVAGVCVVGYFVM
GIVNNAWLPLIISLALMIVAMVILSKFSAKKNPIRYQDK
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggaagcattagaagcagtgaactttggatggatgtccattttacctccgttaattgca
attattcttgcattaataacaaaagaggtattatcgtcattattggtcggtgtatttgca
ggagcactcatttattctggatggaatccaattgaaatggttacaacaaccgttaaaatt
atgggtgagaaaataggatataatgcaaatatattgatttttcttggattgcttggtgca
attgttgtagtagtaactatggcaggaggctcacgtgcttatggggcatgggcatcaaca
aagctaaaaacaagaaaaggggcggcaatggcaactagtgctttgggcgtcttgattttc
attgacgactattttaattgtctgacagttggaacagttatgcgtccggtaacggacaaa
catcgcatctctcgtgcaaaattagcctatattttagatgctaccgccgcaccggtttgt
attattgctccgatttcaagctggggagcatcagttgccagctatatgggagaagccggt
gtgaaaaatggaatggcagcgtttcttcaaacaattccgtataacttatatgctatttgt
acggttgtaatggtagcaattatttgtttatctcgcatcaactttggttcaatggctaaa
tttgaaaaaatagcaattgaaaatggagacgtacatgctgcaaagaagcaagttgaaacc
gaaagctttggtggtgtggaagaaaacaaaaatggcaaggttatagatttagtattacca
ataggaacgttaattgtacttaccattcttgcaatgctatatacgggtggtatgttcgtc
ggaaaaggagttactgcttttcaagcaattggagcaacagatgcatcattatcattggtt
ttaggtggtataggcacactcatctttactttggttttctattctattcgtaaagtttta
ggttttaaagattttatgggtgcaattgctacaggagtaaaatcaatggttcctgcatac
ttaattttgattttagcttggtcaattggtggtatttgtagtacggaatacttaaatgta
ggtggtttcgttggacattgggtaaatgatgcaaacttccctgtgtttattttaccggct
gtaatatttgtggtagcaggtttcctagcttttgcaacaggtacttcatggggtacaatg
gcattgttaattccaatcggagcagcaatttgtattacaccagatacccaagcgttgttg
atccctatttttggatcaattttagcaggagccgtatatggagaccatgtttcccctatt
tccgatacgacaattctttcttctacgggagcaggatgtaaccatatggatcatgtatcg
agccaattgccatatgctactttagtagcaggagtttgtgtagttggatattttgtaatg
ggtatagtaaataatgcgtggttaccacttattatatcgcttgcgttgatgattgtggca
atggttatcttgagtaaattttcagcaaaaaagaatccaattcgttatcaagacaaataa
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