Paludihabitans sp. MB14-C6: RBG61_07420
Help
Entry
RBG61_07420 CDS
T09321
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
palm
Paludihabitans sp. MB14-C6
Pathway
palm00550
Peptidoglycan biosynthesis
palm01100
Metabolic pathways
palm01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
palm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RBG61_07420
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
RBG61_07420
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
palm01011
]
RBG61_07420
Enzymes [BR:
palm01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
RBG61_07420
Peptidoglycan biosynthesis and degradation proteins [BR:
palm01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
RBG61_07420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PBP_dimer_2
Motif
Other DBs
NCBI-ProteinID:
WMJ21833
LinkDB
All DBs
Position
complement(1531661..1533274)
Genome browser
AA seq
537 aa
AA seq
DB search
MNRRSIIVFCSCLLLFSLLFLRIGSLTEDEELSTVGMKQSSYSLTLGQTRGLIYDCNLQS
LVNTSTQYVATVLPTPQNMIEIKNNNVLVAPNNIDEIIQKGKPFLLESNLPFVNVANVNV
YPVSKRYTPKNQLAQHIIGYTDSSGMKGVSGIELAYNDLLNTNAQTSKITYQLNALGKPL
LGAQPIIELAPENKSGVILTIDKRIQAICELAGARHLKKGAIVVMDPYNGDLKAVASFPS
YNPASIASAVKDKENSPLLNRAFSAYNVGSTFKITTTAAALSSGINPNTVFSCNGKIEVL
DVPFKCHEVKGHGKLNLKSALCVSCNPYFIQLGLRLDPSRFLNMARDLSFGKPTQLYDNY
KTASGTLPTLGELQSPAAIGNLSFGQGSLTATPIQIAQMMSSVVNKGNTSFANLIIGTTT
NGKSILYTKKENYPIKAMTEQTANLIKEDLISAVMETPNQNAKPSYTTAGGKTGTAQTGV
KVDENELCQGWFAGFFPADKPQYVVAVLCENARSGNQDASPVFKEIADAMTKPATIN
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgtcgttccattattgtgttttgttcttgccttttgctatttagcttgttattc
cttcgtattggttctttaaccgaagatgaggaattatcaacagttggtatgaaacaatca
tcctattcgctgactctaggtcaaacaagagggttaatttatgattgcaatttacaatca
cttgtgaatacttcaacccaatacgttgcaaccgttttaccgacacctcaaaatatgatt
gaaataaaaaataataatgtattagttgcaccaaataatattgatgaaatcattcaaaaa
gggaagccctttttgttagaaagtaatcttccttttgtaaatgtagctaatgttaatgta
taccccgtatccaaacgatatacccctaaaaatcagcttgcccagcatattatcggctat
actgattcttcgggtatgaaaggcgtttccggaattgaacttgcctataacgatttatta
aataccaatgcgcaaacttctaaaatcacctatcaattaaatgctttaggaaaaccacta
ttaggcgcacaacccattattgagttggcaccagaaaataaaagtggcgtaattttaaca
atagataaacgtattcaagcaatatgtgaattagctggagctcgacatctaaaaaaaggt
gcaattgttgtcatggacccttataatggtgatttaaaagcagttgccagctttccatcc
tataatcctgcttccatcgcttccgctgttaaagataaagaaaattctcctctcttaaat
cgtgctttttccgcttataatgttggttcaacctttaaaataacaacaaccgcagctgcc
ctttcctctggcattaatccaaacactgttttttcttgcaacggtaaaatcgaagtttta
gatgttccttttaagtgccatgaagtaaaaggacacggcaagttaaacttaaagtccgct
ctctgtgtatcttgcaatccttattttatacaacttggattaaggcttgatccaagccgc
ttcttaaatatggctcgtgatttatcatttggaaagccaacgcaactttatgataattat
aaaacagcaagtggtactctccctacactaggagaattgcaaagtcccgctgccattggc
aatctctcttttggacaaggctctttaactgcaactcctattcaaattgcgcaaatgatg
agcagcgttgttaataaaggtaatacttcatttgctaatctaataataggtacaactacc
aacggtaaaagtattttgtataccaaaaaggaaaactatccaattaaagcaatgacagaa
caaaccgccaacctcattaaagaagatttgatttcggctgttatggaaacacctaaccaa
aatgcaaaaccttcctatactaccgcaggtggaaaaacaggaacagcgcaaacaggagta
aaggttgatgaaaatgaactatgtcaaggctggtttgcggggttttttcctgcagataaa
ccccaatatgtagttgctgttctttgcgaaaacgcccgcagtggaaatcaagatgcttct
cctgtttttaaagaaattgctgacgcaatgaccaaacctgccactataaattaa
DBGET
integrated database retrieval system
