Paludicola sp. MB14-C6: RBG61_07570
Help
Entry
RBG61_07570 CDS
T09321
Name
(GenBank) penicillin-binding transpeptidase domain-containing protein
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
palm
Paludicola sp. MB14-C6
Pathway
palm00550
Peptidoglycan biosynthesis
palm01100
Metabolic pathways
palm01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
palm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RBG61_07570
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
RBG61_07570
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
palm01011
]
RBG61_07570
Enzymes [BR:
palm01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
RBG61_07570
Peptidoglycan biosynthesis and degradation proteins [BR:
palm01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
RBG61_07570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
WMJ21862
UniProt:
A0AA51CKY6
LinkDB
All DBs
Position
complement(1565795..1567873)
Genome browser
AA seq
692 aa
AA seq
DB search
MARSFEIKHHRRIVALIILVVMIFTLAVMRVFEYQLVKGEEFLKLAEESSSVQIPIVAAR
GEIVDRNGVPFTQNKATFNLEFDYTFLPKGKENETIYSLIKILEKQGEDWVDELPITKTE
PYKFIEGKEAEVAKLKKKINVNEYTSAQNCMDNIYQMTGIKKYKDKKEKCTHCGKKFEEC
DYKGYDERYSRLIAGIRYEMIQKDFSRWTNRCTVASDITPQTVALVREFSNQLKGLEVVE
RATRTYISGDAASHIIGSLGPIYAEEKDKYKPGQTGSRYSMTDLVGKSGIEKAMENDLKG
INGQMSVVKNSKGDIVDIVETKAPVAGKTVQLSIDLAFQKEVQQILADYIKNFNETNTKN
KNVKGASIVVMDTKTGGVLASVSYPYFDINEYRSNYATLSTREDKPLFNRALNGAYRPGS
TFKPVVAAGALAENKITPSTTVFCDGAYHFWPKWDPLPSCLSIGHRNQSLNVVSALQYSC
NVFFYDTGRILGINKINEYGRLFGFGVETGLELPNAVGNLSGPEYSEKLKAVWNPGNVIQ
AAIGQMDTNVSPLQMAIEASTIANKGTRYNAHLVKSILSNDKKTVVSEKKPTIASQYKMS
DEAFTEISSGMILAGKGIGAPNQLTDLGYDVAVKTGTPQVTKTKTNNAFIAFAPVAQPEI
AISCMVEDGEVANRMVRSILLAYEKAKANWKK
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgctcatttgaaataaaacatcatcgacgcatagtggctttaattattttggtc
gtgatgatctttacacttgccgttatgcgtgtatttgaatatcaattagtaaaaggtgaa
gaatttttaaagttagcagaagaaagttcttctgtacaaattccgattgttgcggcaaga
ggcgaaattgtagaccgaaatggagttccgtttacgcaaaataaagctacatttaatttg
gaatttgactatacgtttttacctaaaggcaaagaaaacgaaactatttattctttaatt
aaaattttagaaaagcaaggcgaagattgggttgacgaattgccaattacaaaaactgag
ccttataaatttattgagggtaaagaagctgaagtagctaaactaaagaaaaaaatcaat
gtaaatgaatataccagtgcacaaaactgtatggataatatctatcaaatgactggtata
aagaaatataaagataaaaaagaaaaatgcacacactgtggtaaaaagtttgaagaatgt
gattataaagggtatgatgaacgctatagccgtttgattgcaggcattcgttatgaaatg
attcaaaaggatttctctcgatggaccaatcgttgtacagttgcttccgatattacacct
caaaccgttgcattggttcgtgaattttcaaatcaactaaaaggtcttgaagtagtagaa
cgtgcaaccagaacttatattagtggtgatgcagcatctcacattattggtagtcttgga
ccaatttacgcagaagaaaaagataaatataagccaggacaaacgggcagcagatatagt
atgactgacttagtcggcaaaagcggtatcgaaaaagcaatggagaatgacttaaaaggt
atcaacggacaaatgtcagttgttaaaaactccaaaggcgatatagttgacattgtggaa
accaaagctccggttgcaggaaaaaccgttcaactctctattgacttagctttccaaaaa
gaagtacaacaaattcttgccgattacattaaaaactttaacgaaaccaatacgaaaaat
aaaaatgttaaaggtgcatctatcgttgtaatggatacaaaaaccggaggcgttttggct
tctgtttcatatccgtattttgatattaacgaatatcgttccaactatgcaaccttatca
accagagaagataaaccgttattcaacagagcattaaacggagcttatcgtccgggttca
acgtttaaaccagtagtagcagctggcgcattggctgaaaataagattaccccatccacc
accgttttttgtgatggagcatatcatttttggccaaaatgggacccactaccaagctgc
ttaagcataggacatagaaatcaaagtttaaatgtagtatctgccctacaatattcttgt
aatgtgtttttttatgatacaggccgtattttgggcattaacaagataaatgaatatggc
cgcctatttggatttggagtcgaaaccggattagaacttccaaatgctgttggtaatctt
tccggaccagagtattccgaaaagttgaaagctgtttggaatccaggaaacgttattcaa
gcggcaattggtcagatggatacgaatgtatcgccactgcaaatggcgattgaagcctct
acaattgcgaataaaggaacacgctataacgctcacttggtaaaaagtattctttccaat
gataagaaaactgttgtttcagaaaagaagccaacgattgcctctcaatataaaatgtca
gacgaggcatttactgaaatttcaagcggtatgattttagcgggtaaaggaattggcgca
ccaaaccaattaaccgatttaggctatgatgtggcagtaaaaacaggtactcctcaggtt
actaaaacgaaaaccaacaatgcgtttattgcatttgcccccgttgctcaacccgaaatt
gcaatttcttgtatggtcgaagatggagaagttgctaatcgtatggtacgctccatttta
ttggcatatgaaaaagcaaaagcaaattggaaaaaataa
DBGET
integrated database retrieval system
