Paludihabitans sp. MB14-C6: RBG61_08110
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Entry
RBG61_08110 CDS
T09321
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
palm
Paludihabitans sp. MB14-C6
Pathway
palm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
palm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RBG61_08110 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
palm03019
]
RBG61_08110 (groL)
03110 Chaperones and folding catalysts [BR:
palm03110
]
RBG61_08110 (groL)
03029 Mitochondrial biogenesis [BR:
palm03029
]
RBG61_08110 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
palm04147
]
RBG61_08110 (groL)
Enzymes [BR:
palm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
RBG61_08110 (groL)
Messenger RNA biogenesis [BR:
palm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
RBG61_08110 (groL)
Chaperones and folding catalysts [BR:
palm03110
]
Heat shock proteins
HSP60 / Chaperonin
RBG61_08110 (groL)
Mitochondrial biogenesis [BR:
palm03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
RBG61_08110 (groL)
Exosome [BR:
palm04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
RBG61_08110 (groL)
Exosomal proteins of other body fluids (saliva and urine)
RBG61_08110 (groL)
Exosomal proteins of breast cancer cells
RBG61_08110 (groL)
Exosomal proteins of colorectal cancer cells
RBG61_08110 (groL)
Exosomal proteins of bladder cancer cells
RBG61_08110 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
CC_CEP250
Motif
Other DBs
NCBI-ProteinID:
WMJ21962
LinkDB
All DBs
Position
complement(1675744..1677375)
Genome browser
AA seq
543 aa
AA seq
DB search
MAKEIIYGEQARKSLQAGIDKLADTVKITLGPKGRNVVLDKKFGAPLITNDGVTIAKEIE
LEDAFENMGAQLVKEVATKTNDAAGDGTTTATLLAQALVREGMKNVAAGANPMVVKKGIQ
KAVEAAVNAIVSNSKVVNGSADIARVATISAADEFVGKLIADAMEKVSADGVITIEESKT
AETYSEVVEGMQFDRGYLSPYMVTDTDKMEAVIDDALILITDKKITNIQDILPLLEQIVK
TGKKLVIIAEDMEGEALATILVNKLRGTFTCVVVKAPGFGDRRKEMLRDIAILTGGEVIS
DELGLDLKETTLEQLGQARQVVIQKENTIIVDGAGQKEEINNRIHQIKAQIETTASDFDR
EKLQERLAKLSGGVAVIKVGAATEIEMKEKKLRIEDALAATKAAVEEGIVAGGGVALINA
IPAVAALLDSNVGDEKTGVAIVCKALEEPIRQIAKNAGLEGSVIIDKIISADKIGYGFDA
YNETYCDMMSAGIVDPTKVTRSALQNAASVASMVLTTESLVADIKEPEAPAAPQMPGGMG
GMY
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagaaattatttatggcgaacaagctagaaaatctctacaagctggtattgat
aaacttgcagatacagtaaaaatcacattaggccctaaaggcagaaatgtcgttttagac
aagaaattcggtgctccattgattactaacgatggtgttaccattgcaaaagaaattgaa
ttagaagatgcatttgaaaatatgggcgcacaacttgtaaaagaagttgcaactaaaaca
aatgatgctgccggtgatggtactactaccgctaccctattagctcaagctttagtacgt
gaaggtatgaaaaacgttgctgccggagcgaacccaatggttgttaaaaaaggtattcaa
aaagcagttgaagctgcagttaatgcaattgtttctaattctaaagtagtaaacggttct
gcggatatcgcaagagttgctactatttctgctgctgatgaatttgttggtaagttaatc
gcagacgcaatggaaaaagtttctgctgacggtgttattacaattgaagaatctaaaact
gcagaaacatacagcgaagttgtagaaggtatgcaatttgatcgtggctacctatctcca
tacatggtaactgatacagataagatggaagctgttattgatgatgctttaatcttaatt
acagataagaaaattactaacattcaagatatcctacctttattagagcaaatcgttaaa
acaggcaaaaaacttgttatcattgctgaggatatggaaggtgaagcacttgctactatc
cttgtaaacaaactaagaggcacctttacttgtgttgttgtaaaagctcctggctttggc
gacagaagaaaagaaatgcttcgtgatattgctatcttaactggtggtgaagtgatttct
gatgaactaggtttagacctaaaagaaactactcttgaacaattaggtcaagctcgtcaa
gttgttattcaaaaagaaaatacaattattgttgatggagctggtcaaaaagaagaaatc
aacaatcgtattcatcaaattaaagcacaaattgaaactactgcttctgattttgataga
gaaaaactacaagagcgtttagcaaaactttccggtggtgttgctgttattaaagttggt
gctgcaactgaaatcgaaatgaaagaaaagaaacttcgaattgaagacgcacttgctgct
acaaaagcagctgttgaagaaggcatcgtagctggtggtggagttgctttaattaacgca
atccctgctgttgctgctctattagattctaacgttggcgacgaaaaaaccggtgttgct
attgtttgcaaagcattagaagaaccaattcgccaaattgctaaaaatgctggcttagaa
ggcagcgtaatcattgataaaatcatctctgctgataaaataggttatggtttcgacgct
tacaatgaaacatactgcgatatgatgtctgccggtattgttgacccaactaaagtaact
agaagcgcactacaaaatgctgcttctgtagcttcaatggtattaactactgaaagctta
gttgctgacattaaagaaccagaagctcctgcagctccacaaatgccaggtggaatgggc
ggaatgtactaa
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