Paludicola sp. MB14-C6: RBG61_08265
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Entry
RBG61_08265 CDS
T09321
Symbol
nifJ
Name
(GenBank) pyruvate:ferredoxin (flavodoxin) oxidoreductase
KO
K03737
pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:
1.2.7.1
1.2.7.-]
Organism
palm
Paludicola sp. MB14-C6
Pathway
palm00010
Glycolysis / Gluconeogenesis
palm00020
Citrate cycle (TCA cycle)
palm00620
Pyruvate metabolism
palm00650
Butanoate metabolism
palm01100
Metabolic pathways
palm01110
Biosynthesis of secondary metabolites
palm01120
Microbial metabolism in diverse environments
palm01200
Carbon metabolism
palm01210
2-Oxocarboxylic acid metabolism
Module
palm_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
palm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
RBG61_08265 (nifJ)
00020 Citrate cycle (TCA cycle)
RBG61_08265 (nifJ)
00620 Pyruvate metabolism
RBG61_08265 (nifJ)
00650 Butanoate metabolism
RBG61_08265 (nifJ)
Enzymes [BR:
palm01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.7 With an iron-sulfur protein as acceptor
1.2.7.1 pyruvate synthase
RBG61_08265 (nifJ)
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Gene cluster
GFIT
Motif
Pfam:
POR_N
POR
EKR
PFOR_II
Fer4_7
Fer4_6
Fer4_2
Fer4
Fer4_9
Fer4_8
Fer4_16
Fer4_10
Fer4_21
Fer4_4
Transketolase_C
Motif
Other DBs
NCBI-ProteinID:
WMJ24459
UniProt:
A0AA51CQT9
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Position
complement(1709888..1713415)
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AA seq
1175 aa
AA seq
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MKRKMKTMDGNTAAAHASYAFTDVAAIYPITPSSNMAEATDKWSAEGKENIFGERVRVVE
MQSEAGAAGAVHGSLSAGALTTTYTASQGLLLMIPNMYKIAGELLPCVINVSARAIASHA
LSIFGDHSDVYACRQTGFAMLAGTNPQEAMDLGAVAHMSTIKSRVPFIHFFDGFRTSHEL
QKVAAWDYADLKEMVDMDAINAFRARALNPEHPVLKGTAQNPDIFFQAREASNSYYNAVP
GIVEEYMNKVNEKIGTDYKLFNYYGAADATNIIIAMGSVNDTIEETIDYLNANGGKYGVV
KVRLYRPFVAEKLIEAIPDSVKHITVLDRTKEPGALGEPLYLDVVASLKGSKFDAIPVLG
GRYGLGSKDTTPAQIIAAFKNTTKNRFTLGIVDDVTDLSLEITENPNTTPAGITCCKFWG
LGADGTVGANKNSIKIIGDHTDMNVQAYFDYDSKKSGGITVSHLRFGAPKIKSTYLINKA
DFVACHNPSYVTKYDMTADLKEGGVFLLNCGWDMAEIEERLPGQVKRDIAKKHIKFYTID
GVKIGKEIGLGGRINTILQSAFFKLANIIPADDAVKYMKDAATASYGKKGEHIVKMNHDA
IDAGAKNVVEVKVPAEWATAADTDLTHVATGDRKDLVDYVNNILVPVTAQKGNTLPVSTF
THMADGVFPQGSAAYEKRGIAVDVPAWNPDNCIQCNFCSYVCPHAVIRPVVMTDEELKNA
PCGTKSAPMTGMPGLNFAMVVSVLDCTGCGSCVNVCPGKKGNKALTMQALDSQLEEQNAF
AYGIDLPTKPEVGVKFKESTVKGSQFKQPLLEFSGACAGCGETPYAKLVTQLFGDRMYIS
NATGCSSIWGGSAPSTPYTVNKSGFGPAWANSLFEDNAEYGYGMYLAQSAIRNRLIKKVE
AIMANACDEAAKATCKEYLDTVNDGSANRIATDKLVAMLENCNCDGAKDILAAKDYLAKK
SVWIFGGDGWAYDIGYGGVDHVLASGEDVNILVFDTEVYSNTGGQASKSTPTGAIAQFAA
AGKEVKKKDLAGIAMSYGYIYVAQIAQGADYNQAIKAFVEAESYNGPSLVIAYAPCINHG
IKTGMGSAQTEEKRAVEAGYWHTFRYDPRLAVEGKNPFQLDSKAPTASYKDFIMGEVRYN
SLARANPTRAEQLFAKAEANAKDKYAQLVAKAAQE
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atcaaaagaaaaatgaaaaccatggacggtaacactgctgccgctcatgcatcctacgcc
tttactgatgttgctgcgatttacccaatcactccatcatcaaatatggctgaagctact
gacaaatggtcagcagaaggcaaagagaatatctttggcgaaagagtaagagttgttgaa
atgcaatcagaagcaggcgctgctggtgctgttcacggttctctttccgctggtgcttta
actactacttacacagcatctcaaggtttattattaatgattcctaatatgtataaaatt
gctggtgagttactaccttgcgtaattaacgtttctgctcgtgctatcgcttctcatgca
ctatctatcttcggcgatcactcagacgtttacgcttgtcgtcaaaccggtttcgctatg
cttgctggcacaaacccacaagaagctatggatttaggcgcagttgctcatatgtcaact
attaaatctagagttcctttcattcacttctttgatggtttcagaacttctcatgagctg
caaaaagttgctgcttgggattacgctgacctaaaagaaatggttgatatggacgctatc
aacgctttcagagcgagagctttaaatccagaacacccagttctaaaaggtactgctcaa
aaccctgatattttcttccaagcaagagaagcttctaactcttactacaatgctgttcct
ggtatcgttgaagagtatatgaacaaagtaaacgagaaaatcggtacagattataaatta
ttcaactactatggtgctgctgatgcaacaaacatcattatcgctatgggttctgttaac
gatacaatcgaagaaactatcgattacttaaatgctaacggtggtaaatacggtgttgtt
aaagtaagattatacagacctttcgttgcagaaaagttaatcgaagctattcctgattcc
gttaaacacatcactgtattagacagaacaaaagagcctggtgcacttggcgagcctcta
tacttagatgtagtagcatctcttaaaggttctaaatttgatgcaatccctgtattgggc
ggacgttacggtcttggctctaaagacacaactcctgcacaaatcattgctgcattcaaa
aacacaacgaaaaatagatttactcttggtatcgtagatgatgttactgatttatcatta
gagattactgaaaatcctaacacaactcctgctggtattacttgttgtaaattctggggt
cttggtgctgacggtactgttggtgcaaacaagaactcaatcaaaattatcggtgaccat
actgatatgaacgttcaagcttactttgactatgactcaaagaaatctggcggtattaca
gtttctcacttaagatttggtgctccaaaaattaaatcaacttacctaatcaataaagct
gacttcgttgcttgtcataacccatcttatgtaacaaaatatgatatgactgctgaccta
aaagaaggcggcgtattcctattaaactgtggttgggacatggctgaaatcgaagaaaga
cttcctggtcaagtaaaacgtgacattgctaaaaaacacatcaagttctatactattgac
ggtgttaaaattggtaaagaaatcggtcttggcggaagaatcaatactattctacaatct
gctttctttaaattagctaacattatccctgctgatgatgctgttaaatacatgaaagat
gctgcaactgcttcttatggcaaaaaaggtgaacacatcgttaagatgaaccatgatgct
attgatgctggtgcaaaaaatgttgttgaagttaaagttcctgctgaatgggctaccgca
gctgatactgacttaactcatgttgctacaggcgatagaaaagatctagttgactatgtt
aacaacatcctagttcctgtaactgcacaaaaaggtaatacacttcctgtttctactttc
actcatatggctgacggtgtattcccacaaggttctgctgcatacgaaaaacgtggtatt
gctgttgacgttccagcttggaatcctgacaactgtatccaatgtaacttctgttcttat
gtttgtcctcatgctgtaattcgtccggttgtaatgactgatgaagaattgaaaaatgct
ccatgcggaacaaaatctgctcctatgactggtatgcctggtctaaactttgctatggtt
gtttctgtacttgactgtactggatgcggctcttgtgtaaacgtttgtcctggtaaaaaa
ggaaacaaagctcttacaatgcaagctcttgattctcaattagaagaacaaaatgcattt
gcatacggcattgatcttcctacaaaacctgaagttggtgttaaatttaaagaatctacc
gttaaaggtagccaatttaaacaacctctattagagttctccggtgcttgtgctggatgt
ggagaaactccatatgctaaacttgtaacacaactatttggcgacagaatgtatatttct
aacgcaaccggttgttcttctatctggggtggttctgctccttcaactccatacacagta
aacaaatcaggctttggtcctgcttgggctaactctctatttgaagataacgctgaatat
ggttatggtatgtatcttgcacaatctgcaattagaaacagactaatcaaaaaagtagaa
gctattatggctaacgcttgcgatgaagctgcaaaagctacttgcaaagaatatcttgat
acagtaaacgatggttctgctaaccgtattgctactgacaaattagttgcaatgttagaa
aactgcaactgtgatggtgcaaaagatattttagctgcaaaagattacctagctaaaaaa
tctgtttggatcttcggtggtgacggatgggcttacgatatcggttacggcggtgttgac
catgttcttgcttctggcgaagatgtaaacatcttagtattcgatactgaagtttactct
aatacaggcggtcaagcttctaaatctactccaaccggtgcaattgctcaattcgctgct
gctggtaaagaagtgaagaagaaagaccttgctggtattgctatgagctacggttacatc
tatgttgcacaaatcgcacaaggtgctgactacaaccaagctattaaagcatttgttgaa
gcagaaagctacaacggtccatctcttgttattgcttatgcaccatgtatcaaccacggt
attaaaactggtatgggctctgctcaaacagaagaaaaacgtgctgttgaagcaggctat
tggcatacattcagatatgacccacgtctagctgttgaaggcaaaaacccattccaatta
gactctaaagctcctactgctagctacaaagacttcatcatgggtgaagttcgttataac
tctcttgctcgtgcaaacccaacaagagcagagcaattattcgctaaagcagaagctaac
gcaaaagataaatatgcacaacttgttgcaaaagcagctcaagaataa
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