Paludihabitans sp. MB14-C6: RBG61_08960
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Entry
RBG61_08960 CDS
T09321
Name
(GenBank) SpoIID/LytB domain-containing protein
KO
K06381
stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:
4.2.2.29
]
Organism
palm
Paludihabitans sp. MB14-C6
Brite
KEGG Orthology (KO) [BR:
palm00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
palm01011
]
RBG61_08960
Enzymes [BR:
palm01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
RBG61_08960
Peptidoglycan biosynthesis and degradation proteins [BR:
palm01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
RBG61_08960
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Gene cluster
GFIT
Motif
Pfam:
SpoIID
SOG2
Presenilin
Motif
Other DBs
NCBI-ProteinID:
WMJ22129
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All DBs
Position
1866132..1867277
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AA seq
381 aa
AA seq
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MKGILWNLIALLCAVAIFSGSIVYAASNIEKITANSSNTIGEDDFYQSDVGIGDLLSSEN
SNQSSSNNSSQLSSVESSAPSSSIPSSSKVSSKQQSSKQQSSIPHSSKPKPSETSSSKPP
IASSEISNENSGNGEIDEDLLHIVSGAVQREIVGTNTAPKSRYYEAYKAQAVACRTYMEY
HKRANGTYPSMPYAAPYAKTIELVKLVWNEKIYYNGSVINAVYHAASGGSTQSAKYVWGG
TLPYLQARPSKYDDYISSSTISQSEAANILASNGISVSGDASNWFDLKNAALTDGGFIDR
ISICGTSVRGRTLRESIFGNSKLKSCKITDISVSDDNITFTTKGYGHGVGMSQLGALGYS
ANEGWNYQQILQHYYIGVTIR
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggaatactttggaatttaatcgcgttgctatgtgctgtagcaatctttagtgga
agcattgtttatgcggcttctaatatagagaaaataacagcaaattcaagtaatacaatt
ggagaagatgatttttatcagagtgatgttggtattggtgatctgctaagctcagaaaat
agcaaccaaagttcatctaacaattcaagccaactaagctcggtagaatcgtcagcacct
agctctagtattccttcatcttcaaaagtatcatccaagcagcaatcttcaaaacagcaa
tcgtctataccacattcttcaaagccaaaaccatccgaaacatcatcatccaagccacca
attgcttcttctgaaatcagtaatgaaaatagcggtaatggagaaatagatgaggattta
ttacatatcgttagcggtgcagtacaaagagaaattgttggaaccaatacagcacctaaa
tctagatattacgaagcttataaagcacaagcagttgcttgcagaacctatatggaatat
cataaaagagcaaacggaacttatccatctatgccatatgctgccccatatgccaaaaca
attgaattagtgaaattggtttggaatgaaaaaatctactacaatggcagcgttataaac
gctgtatatcatgcagcttctggtggaagcactcaaagtgcgaaatatgtatggggcgga
acgcttccatatttacaagcaaggccaagtaagtatgatgattacattagctcttctact
atttcgcaaagtgaagcagcaaacatattagcgtcaaatgggatatctgttagtggagat
gcatctaactggttcgatttgaaaaatgcagcattgacggatggtggatttattgataga
atttctatatgtggtaccagtgtaagagggcgcacattaagagagagtatatttggaaat
tctaagctaaagagttgtaagataaccgatatttcagtttccgatgacaatattactttt
acaacgaaaggatatggtcatggtgttggaatgagccaacttggtgcgcttggttattct
gcaaatgaaggctggaattaccaacaaatactacaacattattatataggggtaacgatt
cgttaa
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