Paludihabitans sp. MB14-C6: RBG61_10300
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Entry
RBG61_10300 CDS
T09321
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
palm
Paludihabitans sp. MB14-C6
Pathway
palm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
palm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
RBG61_10300 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
palm03400
]
RBG61_10300 (priA)
Enzymes [BR:
palm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RBG61_10300 (priA)
DNA repair and recombination proteins [BR:
palm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
RBG61_10300 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
ResIII
Helicase_C
Zn_ribbon_PriA
PIF1
Zn_ribbon_6
nSTAND3
SRP54
TrwB_AAD_bind
Zeta_toxin
SLFN-g3_helicase
Viral_helicase1
nSTAND_NTPase5
AAA_19
AAA_16
Motif
Other DBs
NCBI-ProteinID:
WMJ22376
LinkDB
All DBs
Position
2159123..2161582
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AA seq
819 aa
AA seq
DB search
MQQRMIAKVYVEKSVYHIDQAFDYIVPSQLINTLKRGCRVLVPFGQANKKVQGLVKEVLF
VSEFEGQLKPILAQLDQEPIFDEEMFLIMDFLVKNTFCTYYEAVKTILPTGTNVDVIETY
KLSKAVTTLELAQFNENEKRLIEFLKTAKTKKELSDFLDCSSNLEKKAVVKSLLLKGVIE
KEDLFKQKVATKTAKMVRIADGFDPQGVKLTPKQQEVVRVLQDVSVAMIKEVAYFCGVTE
AVVKALIKKHILETFERVVEIEYEEIASYHINLSDIVLSKEQQDVFDGIMSLVNEKRPHV
ALLHGVTGSGKTQVYIKLIEKVLQENKTAMLLVPEIALTPQLVSKFESLFGNIIAVIHSN
LTPSERLEFFKRIKANQIKIVIGTRSAVFSPLQNIGVMILDEEGEASYKSDQSPRYHARE
IAKLRCVTHNATLVLGSATPSIESFYQARNGKYSLFTMQERYATAQLPSVYIIDMLEEQK
LNNLSPLSEILQQQLKLNLDQHEQSILLINRRGYQSYATCMQCGEVIKCPSCDVAMTYHK
ANGYLMCHYCGHTKKFDALCPSCHSPYIKLTGVGTQKLEDEVQSLFPKARILRMDTDTTY
SRHSYEKNFGDFKRGKYDIMLGTQMIAKGLDFPNVTLVGVINADSGLYSTDYRSSERIFS
LITQVVGRSGRSQKAGRAYIQTFEPDNAVIQFAAQQDYGGFYEDEIQTRKLLTYPPFCDI
CMLGFSGVNEKAVQIAANKAMEIIRQEALKTENITLKVLGVTPASIHKISNKYRYRILMK
CRMNNTFKMFLSKVLKECAKERWMQNVSIFADINGDVNS
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atgcaacaacgtatgattgcaaaagtatatgttgaaaaatcggtctatcatattgaccaa
gcatttgactatatcgttccttctcaacttatcaataccttgaaacgtggttgccgtgtt
ttggttccgtttgggcaagcaaataaaaaagtacaaggcttagtaaaagaagtgttgttt
gtcagcgagtttgaaggacaattaaaaccgattcttgctcagcttgatcaagagcctatt
tttgatgaagaaatgttcttgattatggactttttagtgaaaaatacgttttgcacttat
tatgaagcagtaaaaacaatacttccaacaggaacaaacgtagatgttattgaaacctac
aagttatctaaggcggttactactttagaactagcacaatttaatgaaaacgaaaaaagg
ctgatagagtttttaaaaactgctaaaaccaaaaaagagcttagtgattttttagattgc
agctctaatcttgaaaaaaaagcagttgtaaaatcgttattgttaaagggcgttattgaa
aaagaagatttattcaagcaaaaggttgcaacaaaaacagccaaaatggttcgtattgca
gatggatttgatcctcaaggggttaagctaacaccaaaacagcaagaggttgttcgagtg
ttgcaagatgtgtctgttgcaatgataaaagaagttgcttatttttgcggtgttaccgaa
gcagttgtaaaggcattgattaaaaagcatattttagagacctttgaacgtgtggttgaa
atcgagtatgaagagattgcctcttatcatattaacttaagcgatattgtattatcaaag
gaacaacaagatgtttttgatggtattatgtctttggtaaacgaaaaaaggccccatgtt
gctttgttgcatggtgtaaccggaagcggtaagacacaagtttatattaaattgattgag
aaagtgttgcaagaaaataaaacggcaatgcttttggttccggaaattgcgcttacccca
caattagtaagtaagtttgaaagcctatttggtaatattattgctgttatccattctaat
ttaacgccatctgagcggctcgaattttttaagcgaatcaaagctaaccagattaaaatt
gtgattggtactcgaagtgcagttttctcaccattgcaaaatattggcgttatgatatta
gatgaagagggtgaagcatcttataaatcggatcaatcccctcgttatcatgcaagagaa
atagcgaagcttcgctgtgtgactcataatgcaacattagtattaggctctgcaactcct
tctatcgagagcttttatcaagctcgtaacggtaaatattcactttttacaatgcaagag
cgttatgctacagcgcaattgccaagtgtttatattatagatatgttggaagagcaaaag
ttgaataatttatccccattaagcgaaatattacagcagcaattgaagttgaacttagat
caacatgagcaatccattttgttaatcaatcgcagaggatatcaatcctatgcaacttgt
atgcaatgtggagaggttatcaagtgtccaagctgtgatgtggcaatgacttatcataaa
gcaaatggctatttgatgtgtcattattgtggacatacaaagaagtttgatgcgctttgc
ccaagttgtcatagtccatatattaagctgaccggtgtgggaacacaaaagctggaagat
gaagtgcaatcgttatttcctaaagcaagaattttaagaatggataccgatacaacctat
tcacgccattcttatgaaaaaaattttggcgattttaaacgtggaaaatatgatatcatg
ctaggtacacaaatgatagcaaagggacttgattttccaaacgtaacgttggttggcgtt
attaatgccgatagtgggctttattctactgattatcgtagcagtgaacgaattttttca
ttgattacacaagtagtcggacgcagcgggcgcagccaaaaagcaggtagagcgtatatt
caaacgtttgagcctgataatgcagttattcagtttgcagcacagcaagattatgggggt
ttttatgaggatgaaattcaaacaagaaagctgcttacatatcctccattttgcgatatt
tgtatgctgggattcagcggagtaaatgaaaaggctgttcaaatagcggcaaacaaagca
atggaaattataaggcaagaagctttaaaaacagaaaatattactttaaaggtgttgggt
gtaacgcctgcgagtattcataaaataagcaataaatatcgctatcgcatattaatgaag
tgtcgtatgaataatacatttaaaatgtttctatccaaagttttaaaagaatgtgcaaag
gaacgttggatgcaaaacgtttctatttttgctgatattaacggagatgttaatagttag
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