Paludihabitans sp. MB14-C6: RBG61_11200
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Entry
RBG61_11200 CDS
T09321
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
palm
Paludihabitans sp. MB14-C6
Pathway
palm03030
DNA replication
palm03430
Mismatch repair
palm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
palm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RBG61_11200
03430 Mismatch repair
RBG61_11200
03440 Homologous recombination
RBG61_11200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
palm03032
]
RBG61_11200
03400 DNA repair and recombination proteins [BR:
palm03400
]
RBG61_11200
Enzymes [BR:
palm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RBG61_11200
DNA replication proteins [BR:
palm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RBG61_11200
DNA repair and recombination proteins [BR:
palm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RBG61_11200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DUF1002
RNA_helicase
AAA
Motif
Other DBs
NCBI-ProteinID:
WMJ22551
LinkDB
All DBs
Position
2352009..2352980
Genome browser
AA seq
323 aa
AA seq
DB search
MKYKFYSNKAFIQMLTRSLNSEHLCHAYLFYGAKGIGKKTLANYFAMGVLCKSEEKPCYQ
CSSCHKFLTGNHPDVHIVGIEDNKKSISVDTIRKLRQDAYIKPNESKVQVYIIPNIETMS
IGAFNAFLKVLEEPPETAMFILTAESKAAVPETILSRCISYPLYPLSYEECVQALKELAP
EKEEASIEKAAIHSNGILGKALEIINSESYSEVELISNAILEGILQRNEYEVLKVLTNMK
ADKEKLSNLINELTRVIRNIVLTKVNAQQPVDDQIEALSYKITLTQANKLVEVLQQSNDY
MQSNMNVGLLVNWLCAQIFSVLS
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgaaatataaattttattccaataaagctttcattcaaatgctcactcgctcattgaac
agtgagcatttgtgtcatgcgtatttgttttatggggcaaagggtattggtaaaaaaacg
cttgcaaattattttgcaatgggtgttttatgtaaaagtgaagaaaagccatgttatcaa
tgctcaagttgccataagtttttaaccggtaatcatcccgatgtgcatatcgttggaatt
gaagataataagaagagcatttcggttgataccattcgtaaattaaggcaagatgcatat
ataaaaccaaatgaaagcaaagttcaagtatatatcattccaaatatagaaaccatgtct
atcggagcgtttaatgcttttttaaaagtattagaagaaccacctgagaccgcaatgttt
attttaaccgcagagtcaaaggcagcagtgcctgagactattttatctcgatgcatttct
tatccattataccctttaagctatgaagagtgtgtacaagctttaaaagagcttgctcct
gaaaaagaggaagcttctattgaaaaagcagctatccattcaaatggcatattaggcaaa
gcattggaaattataaatagcgaatcctattccgaagtagagttaatctcaaatgcaatt
ttagaaggtatattacagcgtaacgaatatgaggttctcaaggtccttacaaatatgaaa
gccgataaagaaaaattatcgaatttaattaacgaattgactcgtgtaattcgaaatatt
gttttaacgaaagttaatgcacaacaacctgttgatgaccaaatagaagcgttatcttat
aaaataacattaacgcaagcaaataaattggttgaagtattgcaacaatctaacgattat
atgcaatcaaatatgaacgttggattgcttgttaattggttatgtgctcaaatattttct
gtattatcttaa
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