Paludihabitans sp. MB14-C6: RBG61_11470
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Entry
RBG61_11470 CDS
T09321
Name
(GenBank) transglycosylase domain-containing protein
KO
K05366
penicillin-binding protein 1A [EC:
2.4.99.28
3.4.16.4
]
Organism
palm
Paludihabitans sp. MB14-C6
Pathway
palm00550
Peptidoglycan biosynthesis
palm01100
Metabolic pathways
palm01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
palm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RBG61_11470
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
RBG61_11470
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
palm01003
]
RBG61_11470
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
palm01011
]
RBG61_11470
Enzymes [BR:
palm01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
RBG61_11470
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
RBG61_11470
Glycosyltransferases [BR:
palm01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
RBG61_11470
Peptidoglycan biosynthesis and degradation proteins [BR:
palm01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
RBG61_11470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
C5orf34-like_N
SHOCT
Motif
Other DBs
NCBI-ProteinID:
WMJ22601
LinkDB
All DBs
Position
complement(2401983..2404205)
Genome browser
AA seq
740 aa
AA seq
DB search
MNNNNSTTPRVVRTGPKTTNKRSRKKPSSPTVKKMKRAFAVIGKVLLTTILVLTITGCIV
GTALTIYVTKFIDSGSVIDLSTLKLSFTGTIFAKDKDGKDVEVQNISNGENRVWVDYEKV
PQDLKDAIVYAEDARFWTHSGVDFKRTFGAFFGLLIGEKGFGGGSTIAQQLIKNYNGDIN
NRTIEVKIKEIITAMNLDKNNPKETILEAYMNYIALHYNTYGVQAGAKLYFNKDVSELNL
EECAALAVISKSPATCNPIQNPARNKERRQYALKQMLKYGAITQEEFDKAYNADLKLAGD
KNNDHVKDDNVKTTGPVQKVQSYFIDSVIDEVVNDLMVEKGYNKSNATQKLYSQGFKIYT
SMEIETQKILENYFENPANFKFKGEEAKSLQAYMSIMNYDGNIVATVGGRGKKEGNRILN
RAVSSKRPAGSTMKPLGVYAPAFEQNLINWSTVMEDSAVQKVKDPETGEERDWPSNYEKR
YEGPVTIIDALRVSKNTIPVRIVNALTPQNSFDFVYNKLNLKSLIPTGKINNVNPASLAL
GDGGITVNELVAAYQIFGNGGYYIQPKMYTKVKDGEGKVILDTTTRERKQVISGDTAYIM
NKGLWNVVDNGTGKYAKLSNWETVGKTGTSNDRKDLLFMGLTPYYVAGIRYGFDDNKLEI
NQDRSGGYGHHLKTWKNVMEQVHKGRNKADFELDGSNVVELEFCKETGLLAQSGCPKKET
GYYKKNSLPDVCSLHGSTAP
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgaataataacaactcgacaactccaagggtagtaagaacaggcccaaagacaaccaat
aaaagaagtaggaaaaagccatcatctcctactgttaaaaaaatgaaaagagcatttgct
gtcataggcaaagttttactaactactatacttgttttaacaataaccggatgcattgtc
ggtactgcattaacgatttatgtaaccaagtttattgattctggttctgttattgattta
tcaacattaaaattaagctttactggtacgatctttgcaaaagataaagatggaaaagat
gtagaagttcaaaatatcagcaacggcgaaaatcgtgtgtgggtggactatgaaaaggtt
ccacaagatttaaaagatgcaattgtatatgcagaagatgcaagattttggacgcactcc
ggtgtggactttaaacgtacatttggtgcattttttggattactaattggcgaaaaaggc
tttggtggtggttcaaccatagcccaacagcttatcaaaaactataatggtgatattaac
aaccgtacaattgaagttaaaattaaagaaattatcaccgctatgaatcttgataaaaat
aatccaaaggaaactatcttagaagcatacatgaactatattgctttacactataacact
tatggtgtgcaagcgggtgcaaaactatactttaataaagatgtatctgaattgaattta
gaggaatgtgcagctttagcggttatttcaaaaagccctgctacttgtaatccaattcaa
aatcctgcaagaaacaaagaacgtagacaatatgcgcttaaacagatgcttaagtatggt
gctataacgcaagaagaatttgataaagcatataatgcggacttaaagcttgctggtgat
aaaaacaatgatcatgtaaaggatgataacgtcaagacaacaggtcctgttcaaaaagtt
caaagctactttattgatagcgttattgatgaagttgttaatgatttaatggtagaaaaa
ggctataacaagagtaatgcaacacaaaaattgtattcacaaggctttaaaatctacact
tcaatggaaattgaaactcaaaaaatactagaaaactattttgaaaacccggcgaacttt
aaattcaaaggcgaagaagcaaaatcactacaagcatatatgtccattatgaattatgat
ggtaatatcgttgcaacagtaggcggaagaggtaaaaaagaaggcaaccgtattttaaac
agagcagtatcctcaaaacgacctgccggttcaacaatgaaaccactaggtgtatatgcg
cctgcttttgaacaaaacttaattaactggtccactgttatggaggatagtgctgttcaa
aaagtaaaagatcctgaaacaggtgaagaacgtgattggcctagcaactatgaaaaacga
tacgaaggtccagttactatcattgacgcattgagagtttctaaaaatacaattccggtg
cgcattgtaaatgctttgactcctcaaaattcatttgactttgtttataataagttaaat
ttaaaatcacttatccctacaggcaaaatcaacaatgtcaacccagctagcttggcttta
ggcgatggtggtattactgtaaatgaattagtagctgcttatcagattttcggtaatggt
ggttactatattcaacctaagatgtataccaaagtaaaagatggcgaaggaaaagttatt
ttagacacgactacacgtgaaagaaaacaagttatttccggtgatacagcttatattatg
aataagggcttatggaatgttgtagacaatggtactggtaaatatgcaaaactaagcaat
tgggaaaccgtaggaaaaacaggtacttccaacgacagaaaagacctattgtttatgggc
ttaacaccttattatgttgctggtattcgttatggatttgatgataacaaattagaaatc
aaccaagaccgcagtggtgggtatggacatcatttaaaaacttggaagaatgttatggaa
caggttcataaaggacgtaataaagctgatttcgaattggatggctcaaacgttgttgaa
cttgaattctgtaaggaaacaggattgttagctcaatccggatgtcctaaaaaagaaaca
ggttattataagaaaaatagtttacctgatgtttgtagccttcatggctctacagctcca
taa
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