Paludihabitans sp. MB14-C6: RBG61_12115
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Entry
RBG61_12115 CDS
T09321
Name
(GenBank) glycosyl hydrolase family 18 protein
KO
K01183
chitinase [EC:
3.2.1.14
]
Organism
palm
Paludihabitans sp. MB14-C6
Pathway
palm00520
Amino sugar and nucleotide sugar metabolism
palm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
palm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
RBG61_12115
Enzymes [BR:
palm01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.14 chitinase
RBG61_12115
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_18
TIM-barrel_EndoS
Glyco_hydro_114
RRN3
Motif
Other DBs
NCBI-ProteinID:
WMJ22728
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Position
complement(2538475..2540100)
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AA seq
541 aa
AA seq
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MIKKYVSKSAKQLFAFLLALAITLSMSSIALAKTPESQSNSTKGQNNMATAKQTNKKIVG
YFPSWQPSKLDRIQFDVVTHINYSFLIPNKDATVMPLDHPDTAKELIKQAHANGDKVLIA
VGGWSIGEWPNSIILEPYFVEATNTDEKIAKFTASIMEVVKQYGFDGVDMDWEHPRFGTP
AQTQYEKLLLSLNKELKKDNLLLSTAVLCGVDINGMEYVDAKSQSDIVINTVDYMNVMAY
DGGDAEKHSPYDFAINCGNYWKTTRNFPANKIILGVPFYGRPSWAGYETLLEANPHADES
DISEIWGMQAHYNGVATMKKKATWAKENVGGIMIWELSADTKDKTKSLQTAIGDVMNSTA
PTNGGITVPLEPTIITDTNNTGAKVEIPTEISTLKNSKLEVLKLAVSSDIVEKFAAVAKE
FSLLDTYNINLLNNSVRIEHIEGGKIKIYIPFSNADQGKTYYVLRYNNDGTITELAAIID
KEMLSFETDTLGTYGVATKKIVTLSNTKNPQTGDNSPIIPITIVIILAGGLLIQYKKAKT
L
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgataaaaaagtatgtaagcaaatctgcaaaacaactattcgcttttcttcttgcatta
gccattaccctttctatgtctagtattgcattggctaaaacacctgaaagccaatcaaat
tctacaaaaggccaaaataatatggcgacggcaaaacaaactaataaaaaaattgttgga
tactttccttcatggcaaccatctaaattagatcgaattcaatttgatgtagtaactcat
attaactattcttttttaattccaaacaaagatgcaactgttatgcccttggatcatcca
gacactgcaaaagagcttattaaacaagcacatgcaaatggtgataaagttttaattgcc
gttggcggttggtccattggtgaatggccaaattcaattattcttgagccatacttcgta
gaagcaacaaacaccgatgaaaaaattgctaaatttaccgcttctattatggaagtagta
aagcaatatggatttgatggtgttgatatggattgggagcatcctagatttggaacacca
gctcaaacgcaatatgaaaagctattgctatctttgaataaagagctgaaaaaagacaat
ttactgctttctactgctgttttgtgcggagtagatattaacggtatggaatatgttgat
gccaaatcacaatctgatattgttattaacactgtagattacatgaatgttatggcatat
gatggcggagacgctgaaaaacactcaccttatgactttgctattaattgtggtaactac
tggaaaacaactcgtaactttcctgccaataaaattattcttggtgttccgttttatgga
cgaccatcttgggcaggatacgaaacactattagaagcaaacccacatgcagatgaatca
gatatctctgaaatttggggaatgcaagcacattacaatggtgttgcaactatgaagaaa
aaagcaacatgggcaaaagaaaatgtcggcggaattatgatttgggagctttctgcagat
acgaaagataagacaaagagccttcaaactgcaattggtgatgtaatgaattctacagca
ccaacaaatggtggtataaccgtaccattagagcctacaattataactgatacaaataat
accggagcaaaagttgaaattcctactgaaatcagcaccctaaaaaattcaaagcttgaa
gtcttaaagttagctgtaagctctgatattgtagagaaatttgcagcagtagctaaagaa
ttttctttattagatacatacaacatcaatcttttaaataattctgtaaggatagagcat
atcgaaggtggtaaaataaaaatttatattccttttagtaatgcagatcaaggaaagact
tattatgttttacgttataataacgatggaaccattacagaattagccgcaatcattgac
aaagaaatgttatcatttgaaacagatacgttaggaacttatggagttgcaacgaaaaaa
attgtaacactgtctaacactaagaatcctcagactggtgacaattcgccaatcattcca
attactatagtaattattttggctggcggattattgattcaatataaaaaggcaaaaact
ttatag
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