Paludihabitans sp. MB14-C6: RBG61_13360
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Entry
RBG61_13360 CDS
T09321
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
palm
Paludihabitans sp. MB14-C6
Brite
KEGG Orthology (KO) [BR:
palm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
palm03400
]
RBG61_13360 (radA)
DNA repair and recombination proteins [BR:
palm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
RBG61_13360 (radA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
Lon_C
DnaB_C
ChlI
AAA
AAA_16
NTPase_1
DUF7125
RecA
AAA_14
nSTAND3
AAA_5
Rad51
AAA_22
GvpD_bR2
ABC_tran
zf-RING_10
MCM
GvpD_P-loop
NACHT
Isochorismatase
NPHP3_N
AAA_24
AAA_19
divDNAB
Motif
Other DBs
NCBI-ProteinID:
WMJ22961
LinkDB
All DBs
Position
2809398..2810777
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AA seq
459 aa
AA seq
DB search
MAKPRSLFVCNQCAYETPKWMGRCPECGNWNSFEEQIKAVSTPPAAHKAQIGHNYSNVAE
LIRIGEIDTENEVRFHTGVSELDRVLGGGIVKGSLVLLGGDPGIGKSTLLLQICEYLGKN
LSILYVSGEESVRQLKLRANRLHVNSDNLSILASTDVEVIGNTILQHKPNIVMIDSIQTM
CISSVTSSPGSITQVRESTNAFMRIAKSEDIPIFIVGHVNKDGAIAGPKVLEHIVDAVLY
FEGERNLTYRILRAVKNRYGSTNEIGVFEMTQTGLNEVVNPSLMLLSGRSINVSGTCVAC
VMEGSRPILAEVQALVTKTGFGTPRRTATGFDYNRMNLFLAVLEKRAGYFFGNLDVYINV
VGGLRLDEPGADLSVAMSLVSSLRDKPIDDDIIAFGEIGLGGEVRNVGNISDRVKEAERL
GFTRAIIPKHAVAQINLNKNSNIEILPVSNIKEAFQIIL
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaccaagaagcttgtttgtttgtaatcaatgtgcatatgaaacgccgaaatgg
atgggacgttgtccggaatgtggaaattggaatagttttgaagagcaaataaaagcagta
tctacaccacctgcagcacataaagcacaaatagggcataattacagcaatgttgcagag
ctaattcgcattggagaaattgacactgaaaatgaggtgaggtttcataccggtgtcagt
gagttagatcgtgtactcggtggtggaattgtgaaaggctcacttgttttattaggcggc
gatcccggtatcggtaaatcaacactactacttcaaatatgtgagtatttaggaaaaaat
ctttcgattctttatgtttcaggtgaagagtctgtgcgtcaattgaagcttagagcaaat
agactgcatgtaaacagcgataacctttccattttagcgtctactgatgttgaagtaatc
ggcaatactattttgcagcataagccgaatattgttatgattgactcaattcaaacaatg
tgtattagcagtgtaacctcttcaccaggtagtatcacgcaagtaagagaaagcacaaac
gcatttatgcgtattgccaaaagcgaagatatacctatttttattgtaggccatgtgaat
aaagatggtgcaatagctggacctaaggtgttggaacatatcgttgacgcagtattatac
tttgaaggcgagcgtaatttaacatatcgtattttaagagccgttaaaaacagatatggc
tctaccaatgaaataggtgtgttcgagatgacacaaaccggacttaacgaagtagtaaat
ccatctttaatgttattgtccggtcgttcaatcaatgtatccggaacctgtgtagcttgc
gtcatggaaggttcaagaccgattttagcagaagtacaagcccttgttacgaagacaggc
tttggaacaccaagaagaactgcaaccggatttgattataatcgaatgaatttgtttctt
gcagttttagaaaaacgagcagggtatttctttggcaatttagatgtatatattaatgtt
gtgggtggattacgattagacgagccaggcgcagatttatcggttgctatgtcgttggtt
tctagtcttcgagacaagccgatagatgatgatataatcgcttttggcgaaattggttta
ggtggcgaagtaagaaacgtaggcaatatatcggatcgtgtaaaagaagcggagcgactt
ggcttcaccagagctatcataccaaagcatgcagtagctcaaataaacttaaataagaat
tctaatattgaaatattacctgtgagtaatatcaaagaggcatttcagattatcttataa
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