Pseudoalteromonas aliena: B0W48_00125
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Entry
B0W48_00125 CDS
T04815
Name
(GenBank) transcriptional regulator
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
paln
Pseudoalteromonas aliena
Pathway
paln03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
paln00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
B0W48_00125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
paln03000
]
B0W48_00125
03400 DNA repair and recombination proteins [BR:
paln03400
]
B0W48_00125
Enzymes [BR:
paln01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
B0W48_00125
Transcription factors [BR:
paln03000
]
Prokaryotic type
Helix-turn-helix
AraC family
B0W48_00125
DNA repair and recombination proteins [BR:
paln03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
B0W48_00125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
DUF6233
ArsA_ATPase
Motif
Other DBs
NCBI-ProteinID:
AQP98338
UniProt:
A0A1Q2GT90
LinkDB
All DBs
Position
22107..23459
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AA seq
450 aa
AA seq
DB search
MDTSHWQKARQSRDPRFDGLFYVAVKSTGIYCRPICPAPTAHEKNVAYYQFAHNAAQDGF
RPCIRCRPDSAPGSAAWQGTKTTALRAKQLIDQDDEHDCEKLAARLGISSRYLRQLFKQY
FGVSITQYRLFNQCHFAKKLIQETHLPLTEIAFAAGFKSIRRFNDAFLQQLNIAPSKLRS
GDKKPTSTLTLTLPFRPPYNWPALQGFLQKRLIKPMEWITQTSYGRTFASDEYKGSFTAE
FIENKNHFSVSINIDNTAYLQPVINNIRRVLDLDADINLIQTHLSANINNAFTVCEGLRL
PGIWSSFEAGIRAVLGQQVSVTAAHNLVTKLVDELGEKEGNAIYFPAAEVVVNSDFDFFK
MPQARKNALHNLAQFCALNPQNDDLDEWLSLKGIGPWTVNYAKLRGQSQPDILLDGDLGV
KKAQAAANHFEPANCAPFRSYLTFQLWQQL
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atggacacttcacattggcagaaagcacgtcagagtcgcgatcctcgttttgacgggctt
ttttacgtcgcggtaaaaagtaccggtatttattgtagacctatttgccctgcaccaacg
gctcacgaaaaaaacgttgcttattatcagtttgcccataacgcggcgcaagatggcttt
agaccttgcattcgttgcaggcccgacagtgccccaggtagcgcagcatggcagggtaca
aaaacgactgcacttagagcaaaacagttaatagatcaagatgatgaacatgactgcgaa
aaattagcagctcgtttaggtataagtagtcgttatttaaggcagttgtttaagcagtat
tttggcgtgtcgattacgcaatatcgattatttaaccaatgtcattttgctaaaaagctg
attcaagaaacacatttaccccttaccgaaatagcgtttgctgctggctttaaaagcatt
aggcgctttaatgatgcatttttacagcagttaaatatagctccctcgaagctgcgcagt
ggcgataaaaaaccaacgtcaacacttacattaaccttaccatttaggccgccttataat
tggcctgctttgcagggctttttacaaaaacgtttgatcaaaccaatggaatggataaca
caaacgagttacgggcgtacttttgcaagtgatgaatataaaggcagttttaccgctgaa
tttatagagaataaaaaccactttagtgtatctatcaatatagacaatacggcatactta
caacctgttataaataatatacgccgtgtgcttgatttagatgccgacattaatttaatt
caaacgcatttaagcgccaatataaacaatgcgtttacagtgtgtgaagggctcagactt
ccagggatttggtcgagttttgaagccggtataagggcggtacttgggcaacaagtgagt
gttactgcagcgcataatttagtaacaaagttagttgatgaattaggtgaaaaagagggc
aatgctatttacttccccgcagctgaagttgttgttaatagtgattttgacttttttaaa
atgccacaagcacgcaaaaatgcgctgcataatttagcgcagttctgtgcgctaaaccct
caaaatgacgatttagatgaatggcttagtttaaagggaattggcccttggacggtaaat
tatgcaaagctgcgagggcaaagccaacccgatatattacttgatggcgatttgggtgtt
aaaaaagctcaagcggcggcaaaccattttgagcctgctaattgcgctccttttcgctct
tacttaacgtttcaactttggcagcaattataa
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