Pseudoalteromonas aliena: B0W48_01140
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Entry
B0W48_01140 CDS
T04815
Name
(GenBank) DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
paln
Pseudoalteromonas aliena
Brite
KEGG Orthology (KO) [BR:
paln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
paln03032
]
B0W48_01140
03036 Chromosome and associated proteins [BR:
paln03036
]
B0W48_01140
03400 DNA repair and recombination proteins [BR:
paln03400
]
B0W48_01140
DNA replication proteins [BR:
paln03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
B0W48_01140
Chromosome and associated proteins [BR:
paln03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
B0W48_01140
DNA repair and recombination proteins [BR:
paln03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
B0W48_01140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-CCDC81_euk_2
Arteri_nsp7a
UBA_HYPK
HU-DNA_bdg
Motif
Other DBs
NCBI-ProteinID:
AQP98516
UniProt:
A0A1Q2GTT1
LinkDB
All DBs
Position
246369..246644
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AA seq
91 aa
AA seq
DB search
MNKAQLVEKIATDAEISKAAATRALDAFTGAVTSSLKEGDSVALVGFGTFSVKERAARTG
RNPQTGAEIQIAAATIPSFKAGKGLKDQVNL
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagctcaattagttgaaaaaattgctactgatgcagaaatctctaaagccgct
gctactcgtgcacttgacgcgttcactggcgctgtaacttcttctttaaaagaaggcgat
tcagtagcattagttggttttggaactttctcagtaaaagaacgcgcagcgcgcacaggc
cgtaacccgcaaacgggtgctgagatccaaatcgcagcggcaactatcccaagctttaaa
gcaggcaaaggtcttaaagaccaagtaaacctttaa
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