Pseudoalteromonas aliena: B0W48_01995
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Entry
B0W48_01995 CDS
T04815
Name
(GenBank) exonuclease sbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
paln
Pseudoalteromonas aliena
Brite
KEGG Orthology (KO) [BR:
paln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paln03400
]
B0W48_01995
DNA repair and recombination proteins [BR:
paln03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
B0W48_01995
Archaeal homologous recombinant proteins
B0W48_01995
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Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
Fer4_12
DNA_pol_E_B
Motif
Other DBs
NCBI-ProteinID:
AQP98675
UniProt:
A0A1Q2GU83
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Position
complement(440891..442138)
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AA seq
415 aa
AA seq
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MKVLHTSDWHLGQQFYEHDRRVEHQAFFTWLLATLVEQQIDLLLVAGDIYHTATPSANAE
NQLYQFIKDAKKQCPALHIIIIAGNHDSANRILAAQPLLAQFDTHVVGRFDVATPNEAVI
TINTNGKHAVIVAMPFLRASDVSSISQTQNGPSYAQGVAKAYELALEHAAHINEQHSPLI
VMGHLHAKGGDISSDSERNLVIGGEESISANVFGKQANYIALGHLHKAQQVAKSDVIRYS
GTPIPMSFSERNYTHQVNIIEFITDEKQHISTTVNPLYIPRSADVIILPKGECVPLSELC
EQIKVLDTTQNTIAPYLRVKLKSSDTDTTFREQIEQALEGKHIKFCGIERVREQSANNES
DTVFEDLSEVEMLNPLNLLEQAFANDKDMAGQSVPDELKTLLSDVINELTEQEQL
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtcctccacacctcagattggcaccttggccaacaattttatgaacacgaccgc
cgtgttgaacaccaagccttttttacatggttattagccactcttgttgaacaacaaata
gacttacttttagttgctggcgacatttatcatacagcaacacccagtgctaatgccgag
aaccaattataccaatttattaaagacgcaaaaaaacagtgcccagcattacacataatt
attattgccggtaaccacgactctgcaaatcgtattttggcagctcagccattactagca
caatttgatacacatgtagtagggcgctttgatgtcgcaacacccaatgaagcagttatt
accataaataccaatggtaaacatgctgtaatcgttgctatgccctttttgcgcgcaagc
gatgtaagttcaattagccaaactcaaaacggccctagctatgcacaaggcgttgcaaaa
gcttacgaacttgccctagagcatgccgctcatataaatgagcaacactcaccattaata
gttatggggcacttacatgcaaaaggcggggatatttctagtgattctgagcgtaacttg
gtaattggtggtgaagagtccatttcagccaatgtatttggtaaacaggccaactacatc
gcccttggccatttacacaaagcgcaacaagtcgctaaaagtgatgttattcgttacagc
ggcacaccaatacctatgtcgttttcagagcgtaattacacgcaccaagtaaatattatt
gagtttataactgatgaaaaacaacatattagtacgactgtaaaccccctttacattccg
cgctctgccgatgtaattattttaccaaaaggggagtgtgtaccattaagcgaactatgc
gagcaaattaaagtgctcgacacgacacaaaatacaatagcgccttatttgcgggtaaag
cttaaatcaagcgataccgacaccaccttcagagaacaaatagaacaagcacttgaaggc
aagcatattaaattttgtggtattgaacgcgtacgtgagcaatccgctaataatgaaagt
gacaccgtatttgaagatttaagcgaagttgaaatgctcaacccgcttaacttattagaa
caagcatttgcaaacgataaagacatggctgggcaaagtgttcccgatgaactaaaaaca
cttttaagtgacgtgatcaacgagcttacggagcaagagcaactatga
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