Pseudoalteromonas aliena: B0W48_04540
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Entry
B0W48_04540 CDS
T04815
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
paln
Pseudoalteromonas aliena
Pathway
paln03030
DNA replication
paln03430
Mismatch repair
paln03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
paln00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
B0W48_04540
03430 Mismatch repair
B0W48_04540
03440 Homologous recombination
B0W48_04540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
paln03032
]
B0W48_04540
03400 DNA repair and recombination proteins [BR:
paln03400
]
B0W48_04540
Enzymes [BR:
paln01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
B0W48_04540
DNA replication proteins [BR:
paln03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
B0W48_04540
DNA repair and recombination proteins [BR:
paln03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
B0W48_04540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DUF5863
MtmB
Motif
Other DBs
NCBI-ProteinID:
AQP99140
UniProt:
A0A1Q2GVW9
LinkDB
All DBs
Position
complement(1029810..1030433)
Genome browser
AA seq
207 aa
AA seq
DB search
MVKQLLTQYLKRRRLLGKNALHQRYLVIDLELTGLDAKQHEIVSVAWVEIDNQCIKMSES
QHIINKDVISLEQSPVYHGINDDAVAKGQSLHSILTRLSSHFSDCILVFHNAMLDWGFLK
IALKNANITTRPKLILDTLHIEKKRLLNQSTEIKQDDLTLNTCRIRYELPSYHCHHALTD
AQATAELLLAQCRQISRGKELKVRELT
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
atggtaaaacaactacttactcagtatttaaagcgccgcaggttactaggcaaaaacgcc
ttacatcaacgctacttagtgattgatttagagcttaccggccttgatgccaaacagcac
gaaatagtgtctgtagcgtgggtggaaatagataatcaatgtataaaaatgagtgagtcg
cagcacattatcaataaagacgttataagcctcgaacaaagccctgtttatcacggtata
aatgacgatgcggtagcaaaagggcaaagtttacacagtatactaacgcgactaagcagc
cactttagtgattgtattttagtgtttcataatgccatgctcgattggggctttttaaaa
atagccctaaaaaatgctaatataacaacgcggcctaaactgatactcgacaccctccac
atcgagaaaaagcgcttactcaaccaatcaactgaaataaaacaagatgatttaaccctt
aatacctgtcgtatacgttatgagttaccaagctatcattgtcatcatgcgttaacagat
gcacaagcgaccgccgaattactgctagcccagtgccgtcaaataagccgtggtaaagag
ctaaaagtacgcgaattaacctag
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