Pseudoalteromonas aliena: B0W48_06850
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Entry
B0W48_06850 CDS
T04815
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
paln
Pseudoalteromonas aliena
Pathway
paln03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
paln00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
B0W48_06850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
paln03021
]
B0W48_06850
03400 DNA repair and recombination proteins [BR:
paln03400
]
B0W48_06850
Enzymes [BR:
paln01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
B0W48_06850
Transcription machinery [BR:
paln03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
B0W48_06850
DNA repair and recombination proteins [BR:
paln03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
B0W48_06850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
AQP99541
UniProt:
A0A1Q2GWN1
LinkDB
All DBs
Position
complement(1553993..1554979)
Genome browser
AA seq
328 aa
AA seq
DB search
MQGSVTEFLKPRLVDIDAINPTRSKIVLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IDGVLHEYSAKEGVQEDIIEILLNLKGLAVTLEGKDEVFLTLTKSGVGPVTASDIQHDGD
VTIANPDHVICNLTTNNSEISMRIRVERGRGYVPASSRLSSDDDERPIGRLLLDASFSPV
ERIAYSVESARVEQRTDLDKLIIDMETNGTLDPEEAIRRASTILAEQLDAFVDLRDVTEP
EEKEEKPEFDPILLRPVDDLELTVRSANCLKAEQIQYIGDLVQRTEVELLKTPNLGKKSL
TEIKDVLASRGLSLGMRLENWPPASLAE
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgcagggttctgtaacagaatttctaaaaccaaggttagtcgacatcgacgctatcaac
ccaacgcgttctaaaatagttttagaaccattagagcgtggcttcggtcatactctgggt
aatgccttacgccgtatattgctttcatctatgcctggatgtgcagtaactgaagttgaa
atcgacggtgtattgcatgagtacagcgcgaaagaaggcgtacaagaagacatcattgaa
atactattaaacttaaaaggtttagcagtaacgttagaaggcaaagatgaagtttttctg
accctgactaaatctggtgtaggtcctgttactgcgtctgatattcagcacgatggcgat
gtaacaattgctaatccagatcacgttatttgtaatttaacaacaaataacagcgagatc
agcatgcgaattcgtgttgaacgtggtcgtggttatgtgccggcatctagtcgtttatcc
tctgatgacgatgagcgtccaattggtagattgttgcttgatgcatcatttagtccagtt
gaacgtattgcgtactcggttgaatcagcccgtgttgagcaacgtacagatttagacaag
ttaatcattgatatggaaacaaacggcactttagatccagaagaagcgatccgccgtgcg
tctactatcttagctgagcaattagatgcattcgtagatttacgtgatgtaactgagcca
gaagagaaagaagagaagccagaattcgatcctattctacttcgtccagttgatgatctt
gagctaacagtacgctcagcaaactgcttgaaagccgagcaaattcaatatatcggtgat
ttagttcagcgcactgaagttgagcttcttaaaacgcctaatctaggtaagaagtctcta
actgaaattaaagacgtgctagcttcacgtggtctttctctgggcatgcgcctagaaaat
tggccacctgcaagtttagctgaataa
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