Pseudoalteromonas aliena: B0W48_08705
Help
Entry
B0W48_08705 CDS
T04815
Name
(GenBank) 23S rRNA pseudouridine synthase F
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
paln
Pseudoalteromonas aliena
Brite
KEGG Orthology (KO) [BR:
paln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
paln03009
]
B0W48_08705
Enzymes [BR:
paln01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
B0W48_08705
Ribosome biogenesis [BR:
paln03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
B0W48_08705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
SYY_C-terminal
Motif
Other DBs
NCBI-ProteinID:
AQP99863
UniProt:
A0A1Q2GXL1
LinkDB
All DBs
Position
complement(1961917..1962609)
Genome browser
AA seq
230 aa
AA seq
DB search
MSTKIRLAKYIAHAGICSRKQASRLIDEGVVTVNNRPANHIDHVDEQDTVIVNEKEIKGA
ADLVYFAYHKPVGIDCKLNIDDPASLIHHLPTLTRVYPIGRLDKDSRGLLILTNDGDFCN
QLIHPDFHQPKHYLVTVNKPLDDAFCKKMAAGVPVDKHVTLPCEVNKIASNQFSIVLKQG
LNRQIRKMAHYCGYKVIDLFRVQFSDLTLSKLNLPENQYIQINKNDISKT
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgagtacaaaaatccgactcgctaaatatattgcccatgcaggtatttgctctcgcaaa
caagcctcgcgtttaattgatgaaggcgttgtgactgtaaataatcgcccagctaatcac
attgatcacgttgatgagcaagacactgtaatagtgaacgaaaaagaaattaaaggtgct
gccgatttagtttattttgcgtaccacaaaccagtaggtattgactgcaaattaaatatt
gatgacccagccagccttattcaccatttgcccacactcactcgtgtttaccccattggc
cgccttgataaagactctcgcggtttacttattttgaccaatgatggggatttttgtaat
caactaatacatcctgacttccaccagcctaaacattatttagtcaccgtaaataagcct
ttagacgatgctttttgtaaaaaaatggcagcaggcgtaccggttgataaacacgtaacc
ctgccttgcgaagttaataaaatagctagcaatcaatttagtattgttttaaagcaaggg
ttaaacaggcaaatacgtaaaatggcgcattactgcggctacaaagtaattgatttattt
agagtgcaatttagtgacctcaccctttcaaaactaaacctacctgaaaaccaatatata
caaattaataaaaacgatatttcaaaaacctaa
DBGET
integrated database retrieval system
