Pseudoalteromonas aliena: B0W48_09930
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Entry
B0W48_09930 CDS
T04815
Name
(GenBank) signal peptide prediction
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
paln
Pseudoalteromonas aliena
Pathway
paln02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
paln00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
B0W48_09930
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
paln02000
]
B0W48_09930
Transporters [BR:
paln02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
B0W48_09930
BRITE hierarchy
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GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
Motif
Other DBs
NCBI-ProteinID:
AQQ00080
UniProt:
A0A1Q2GY80
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All DBs
Position
complement(2231767..2233029)
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AA seq
420 aa
AA seq
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MDTPKRSTLKKLATLGLAAGVITHAPYVFARKKITLRVLGTHVTLQEAIRKQAMSDLGID
IQFSPAGSAAVLQKASMDPSSFDLYEQWSNSINILWNAGSIQPIEKKRLIHFNEINPLTK
TGRLTPNANIGAGDAPYKLLNVQADGTLSSQESDHISFLPYVHNVDSFGYNTQFIKPGIA
YETESWSWLLDATNKGKVGIVNAPAIGLFDLALAAQSKGLITFGNIGAMTRAELDKLFSI
LLDFKRQGHFSGYWNSVPESVEFMKSERVHIESMFSPAVSTLNGQGVNVRFAAPKEGYRG
WHGVMCLSSQTQDSVKDAAYDYMNWWLSGWPGAFIARQGYYISNPQRSKPLLSPHEWDYW
YDGKAAKANLLDTDGKIAVKMGEQRNGGSYLKRFSNVAVWNTVMPTYDYSLQKWYELISR
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggatacccccaagcgctcaacactaaaaaaacttgcgactctaggcttagcggccggt
gtgattacacatgctccttatgtatttgctcgcaaaaaaataacattaagggtgcttggc
acacatgtaactttacaagaagctattcgcaaacaagcaatgagtgacttaggtattgat
atacagttttctcctgctggcagtgctgcggtcttgcaaaaagcctctatggatcccagc
tcattcgatttatatgagcagtggtctaatagtattaatatactgtggaatgcaggttcc
attcagcctatagaaaaaaaacgactgattcattttaatgaaataaacccactgaccaaa
actggacgcctaacacccaatgccaatattggtgctggggatgcgccttataaattatta
aatgtgcaagcagatggaacattaagctcacaagaaagcgaccacatcagctttttaccc
tatgtacataatgttgactcttttggctataacacacaattcataaaacctggcattgct
tacgaaactgaaagttggagctggctactagacgctaccaataaaggcaaagtaggcatt
gtaaatgcgcccgctattggcttattcgatcttgcattggcagctcaaagcaaagggctt
attacctttggcaatataggcgcgatgactcgagctgagctagataagctatttagtatt
ttacttgattttaaacgccaaggtcattttagtggttattggaactcagttcccgagtcc
gtcgagtttatgaaaagtgaacgagtacacatagaaagcatgttttcaccagctgtctca
acgctaaatgggcaaggtgtaaatgtacgttttgcagcgccaaaggagggctatagaggc
tggcatggcgttatgtgcttatcatcacaaacacaagatagtgtaaaagatgcagcttac
gattatatgaattggtggttatccggttggcctggcgcttttattgctcgccaaggctat
tatattagtaatcctcaacgctcaaaacccttactgtcgcctcatgagtgggattactgg
tacgacggtaaagctgcaaaagctaatttattagataccgatggaaaaatagcagtaaaa
atgggagaacaacgtaatggcggcagttaccttaaacgttttagcaatgttgcggtatgg
aatacagtgatgccaacatacgactatagtttacaaaaatggtatgagttgattagtcgc
taa
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