Pseudoalteromonas aliena: B0W48_10015
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Entry
B0W48_10015 CDS
T04815
Name
(GenBank) lytic transglycosylase
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
paln
Pseudoalteromonas aliena
Brite
KEGG Orthology (KO) [BR:
paln00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
paln01011
]
B0W48_10015
Enzymes [BR:
paln01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
B0W48_10015
Peptidoglycan biosynthesis and degradation proteins [BR:
paln01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
B0W48_10015
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SLT
LysM
LysM3_LYK4_5
LysM1_NFP_LYK
LysM2_CERK1_LYK3_4_5
Motif
Other DBs
NCBI-ProteinID:
AQQ00095
UniProt:
A0A1Q2GYC7
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All DBs
Position
complement(2247257..2248717)
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AA seq
486 aa
AA seq
DB search
MRSLVLFCLSLFLFGCGSTEPELQDAPKILTHHEADYQSENELQKKQISSKLAPSPLKQT
DIKKRQTQVTDLWVHVANNLHFKIHKNVALNKRINWYLKQPNYLRTVNKRAAPYFYHIVK
KVEKKGLPMELALLPFVESGFRPTIVSSQQAVGIWQLVAATAHHFGVKSDQWYDGRQDVL
ASTDAALDYLSYLHKRFDGNWLHALAAYNTGEGRVKRAIEKNKKRGKSTDYWSLSLPKET
ADYVPKLLALSYLVKHPQKPLKRPKLAYKPLTTQMDVGQQFDFSVIAKLSGVGSKKLHAL
NQGYLKNQSSPNGPHTLLLPIRQEALLKSQFFRANFAGEYIVIKNDTLYSIARRFDMSVI
ALKQLNNKQTNLISVGEKLLVGQPKTLQKSLTVDYKISPYLEHKELVIPTIEINYEVKQG
DNLWEISQLYHVAHSDLAKWNKLSASSVLKPGTQLVMFIPQAKKPKAIPIKKNLLLDLQK
TLNQPR
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgcgcagcttggttttattttgtttaagtctatttttatttggttgcgggagtacagag
cctgagctacaagacgctccaaaaatacttacccaccatgaggctgattaccaatctgaa
aatgaattacaaaaaaaacaaatcagttctaaactagcaccatcgccacttaaacaaact
gatattaaaaagcgtcaaactcaagtaactgacttatgggtacatgttgcgaataatctg
catttcaaaattcataaaaacgttgcgttaaataaacgcattaactggtatttaaaacag
ccaaattatttacgcacagtaaataagcgcgccgctccctatttttatcacattgttaaa
aaggttgaaaaaaaaggcttaccaatggagctcgcgttactgccatttgttgaaagcggc
tttaggcccacaatcgtatcatcgcaacaagctgtaggcatatggcagctagtagctgca
acggcacatcactttggtgtaaaatcagatcaatggtatgacggtcgtcaagatgtactt
gcttcaaccgatgcagcgcttgattacttaagctacttacacaaacgttttgatggtaat
tggttacatgcccttgctgcttacaacactggcgaaggtcgcgttaaacgcgcaatcgaa
aaaaacaaaaaacgcggtaaaagcaccgattactggtcactcagtctgccaaaagaaacc
gccgactacgtacctaaactacttgcattgagctacctagttaaacacccacaaaaacca
ctcaagcgcccaaaattagcttataaaccattgactacacaaatggatgtcggtcaacaa
tttgatttttcggtgatcgctaaactttcaggtgtaggttcaaaaaaattacatgcgctc
aatcaaggctatttaaaaaatcaaagctcacccaatggcccgcacactttacttctccct
atcagacaagaagcacttttaaaaagccaattttttagggctaattttgcaggtgaatac
atagtaataaaaaacgatacactttatagcattgcaaggcgtttcgacatgtcggtcatc
gccttaaaacagcttaataataaacaaacaaacttaattagtgttggtgaaaagctctta
gttgggcaaccaaaaacgcttcaaaaatcccttacggttgactataaaataagtccctac
cttgaacataaagaattggttatccccactatagaaataaactatgaagtaaaacaaggt
gataatctatgggaaatcagccagctgtatcatgtagctcatagcgatttagctaaatgg
aataaactctctgcatcgagtgtattaaaacctggtacgcaactcgtgatgtttataccc
caagcaaaaaaacccaaagcaataccaataaaaaagaatttactattagatctacaaaaa
acactaaatcaaccacgttaa
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