Pseudoalteromonas aliena: B0W48_10425
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Entry
B0W48_10425 CDS
T04815
Name
(GenBank) RNA polymerase factor sigma-32
KO
K03089
RNA polymerase sigma-32 factor
Organism
paln
Pseudoalteromonas aliena
Brite
KEGG Orthology (KO) [BR:
paln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
paln03021
]
B0W48_10425
Transcription machinery [BR:
paln03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
B0W48_10425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
GntR
Sua5_C
Motif
Other DBs
NCBI-ProteinID:
AQQ00171
UniProt:
A0A1Q2GYS7
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All DBs
Position
2342067..2342930
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AA seq
287 aa
AA seq
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MSKDLYAMALTVGQQSASMDGYLQAVSTIPMLKVEEEQELAKRLQEEGDLSAAKQLIMSH
LRFVAHIAKSYSGYGLPQADLIQEGNIGLMKAVKRFDPTVGVRLVSFAVHWIKAEIHEFV
LKNWRIVKVATTKAQRKLFFNLRKNKKRLGWFNQAEVSTVASELGVSEKEVREMESRMSG
QDMGFDLTGDDDDNAPTSTYSPVQYLTDGAADLADDVEQQQWKEQAHTRLFSALKTLDER
SQDIVSARWLSDDKATLQELAQKYSVSAERVRQLEKTAMKKLQSAMS
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaagatttatacgcaatggcacttacagtcggacaacaaagcgcaagcatggac
ggttaccttcaagcggtaagcactatccctatgcttaaagttgaagaagagcaagagctt
gccaagaggcttcaggaagaaggcgatcttagtgctgcaaagcaactcattatgtcgcat
ttacgttttgtagcgcatattgctaaaagctactcgggttatggtttgccacaagcagac
ttaattcaagagggcaacattggcctgatgaaagcggtaaagcgtttcgaccctaccgta
ggtgttcgtctagtatcgtttgcagtgcattggattaaagcagaaattcatgagttcgtg
cttaaaaattggcgtattgttaaagttgcaacgaccaaagcacaacgtaaattatttttt
aatctgcgcaaaaataaaaaacgcttaggttggtttaatcaagctgaagtaagcactgtg
gcaagcgagctaggtgtgagtgaaaaagaagtgcgtgaaatggaatcgcgtatgagcggc
caagacatgggctttgacttaactggtgatgatgacgataacgcaccaacaagcacttat
tcacccgtacaatacttgactgacggcgcagctgatttagctgatgacgttgagcagcaa
cagtggaaagagcaggcgcatacgcgtttatttagcgcacttaaaacacttgatgaacgc
tcacaagatattgttagcgcacgttggttgtctgacgacaaggcaactcttcaagagctt
gcacaaaagtacagtgtatctgctgaacgtgttcgtcagcttgaaaaaacagcgatgaaa
aagctacaaagcgctatgagctaa
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