Pseudoalteromonas aliena: B0W48_11080
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Entry
B0W48_11080 CDS
T04815
Name
(GenBank) ATP-dependent RNA helicase SrmB
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
paln
Pseudoalteromonas aliena
Brite
KEGG Orthology (KO) [BR:
paln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
paln03009
]
B0W48_11080
Enzymes [BR:
paln01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
B0W48_11080
Ribosome biogenesis [BR:
paln03009
]
Prokaryotic type
rRNA helicases
B0W48_11080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
UvrD-helicase
Helicase_RecD
AAA_30
AAA_22
SAM_3
AAA_11
Phage_integrase
SNF2-rel_dom
PhoH
Motif
Other DBs
NCBI-ProteinID:
AQQ00295
UniProt:
A0A1Q2GYX4
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All DBs
Position
complement(2487766..2488992)
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AA seq
408 aa
AA seq
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MQFSDFDLDNKLLDAINKMGYETPTSIQQQAIPEALKGRDVLASAPTGTGKTAAFLIPAI
QYLLDFPRRDPGFARVLVMTPTRELAYQIHEQCELLAKRTNLKIGVVTGGINYGTHKEIF
EKNNDILIATPGRLMEYLETENFHAEHVEMLIIDEADRMLDMGFKKEMKRICDEARNRRQ
CFLFSATLEGDSVERFAETTLNDPALLEAESSRKEKAKIHQWVHLADDYHHKLELLVNTL
KNPDVTKAIVFVKTRERLETLIGELTNNDVKAAWLRGEMPQDKRMKAMENFHSGKTRILI
ATDVAARGIDVSDISHVINFDMPRTADVYVHRIGRTGRAGKKGIAISLVEAHDIGILYKV
ERYVEQKLKRRVIKGVEPQHKEAKPPAKKRKDPVKMKAKKKAKVKKKK
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgcaattttctgactttgatcttgataacaagttactcgacgctattaataaaatgggt
tacgaaaccccaacaagtattcaacaacaagcgattcctgaagcgcttaaagggcgtgat
gttttagcatcagcgcctacaggcacaggtaaaaccgcagcatttttaattccagctatt
caatatttattggatttcccgcgccgtgatccagggtttgcacgcgtgctagttatgact
ccaacgcgtgaacttgcttatcaaattcatgagcaatgtgaactacttgcaaagcgaact
aacctaaagataggcgtcgtaactggcggtataaattacggcacgcataaagaaatattt
gaaaaaaacaatgatatattaatcgccacaccggggcgtttaatggaatatttagaaact
gaaaactttcatgctgaacacgtagaaatgcttattattgacgaagctgatcgcatgtta
gacatgggctttaaaaaagaaatgaagcgtatatgtgacgaagctagaaatcgtcgtcag
tgctttttattctcagcaacccttgaaggtgacagtgtagagagatttgcagaaacaaca
cttaacgaccctgcattacttgaagctgagtcatcacgtaaagaaaaagccaagattcat
cagtgggttcatttagctgacgattatcatcataaacttgaattattagtaaacacactt
aaaaaccctgatgttactaaagcaattgtgtttgtaaagacccgtgagcgcctagaaaca
ctgattggcgaattaaccaacaatgatgttaaagctgcatggttacgcggtgaaatgcct
caagacaaacgtatgaaagcgatggaaaactttcatagtggcaaaacacgtatattaatt
gctaccgacgtagctgcacgtgggattgacgtgtctgacatcagccatgttattaacttt
gatatgccacgtaccgccgacgtatacgtacaccgtattggccgtaccggtcgtgctggt
aaaaaagggatagcaatatcgttagttgaagcacacgacattggtattttatataaagta
gagcgctacgttgagcaaaaattaaaacgccgtgtaattaaaggtgttgaaccacagcat
aaagaagctaagccaccagctaaaaagcgtaaagacccagtaaaaatgaaagccaagaaa
aaggccaaggttaaaaagaaaaagtaa
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