Pseudoalteromonas aliena: B0W48_11910
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Entry
B0W48_11910 CDS
T04815
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
paln
Pseudoalteromonas aliena
Brite
KEGG Orthology (KO) [BR:
paln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
paln03016
]
B0W48_11910
Enzymes [BR:
paln01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
B0W48_11910
Transfer RNA biogenesis [BR:
paln03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
B0W48_11910
Prokaryotic type
B0W48_11910
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AQQ00438
UniProt:
A0A1Q2GZE2
LinkDB
All DBs
Position
2651798..2652850
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AA seq
350 aa
AA seq
DB search
MSDLNYLYGAPLSKADFKTTAEDFMVDEDLGIEFTGSGEHVCLQVVKKGENTQYVAKLIA
QRAGVSPRDVSYAGMKDRHGVCSQWFSVKVPIKKPIDFSDLNSESIFIVSQQRHDRKLRT
GCHKGNKFTITLRNVTQPLDILCRINAVRAGVPNYFGEQRFGHGGHNLVMAEKMFAGERI
RDKKLRGIIISAARSHVFNQLVSLRVKEHGLAKTMHREVFMLSGSNAFFEDAINDENIER
LATGDIVMSAPMVGKSEKGLTEQEKIWLEPFQTWCDGLGELGLKNERRMLRLIPQNLAVE
TLDETTLKLSFGLPKGCFATALLRELVDYRDASPRERKEKDNDINEDTVK
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatttaaattatttatacggcgcgccgctttctaaagctgactttaaaaccact
gctgaagactttatggtggatgaagaccttggtatagaatttaccggcagtggcgaacac
gtgtgtttacaagtcgttaaaaaaggcgaaaatacgcaatatgtcgcaaagctaattgcg
cagcgcgcaggtgtttcaccgcgagacgtgagttacgcaggcatgaaagatcgccacggt
gtgtgctcgcagtggtttagtgtaaaagtaccgattaaaaagcctatcgattttagcgat
ttaaatagcgagagtatttttattgtgtcgcaacagcgccacgaccgtaaattgcgcacg
ggttgccataaaggtaataaatttactattacgcttcgtaatgttactcagccgcttgat
attttatgtcgtattaacgcagtgcgcgcaggtgtgccaaattactttggcgagcagcgt
tttgggcatggcggccataacttagtaatggcagaaaaaatgtttgctggtgagcgaatt
cgcgataagaaactgcgcggtattattatttcagcagcgcggtcgcatgtatttaatcaa
ttagtgagtttgcgtgttaaagagcatggtttagctaaaacaatgcaccgtgaagtattt
atgcttagcggcagtaatgcattttttgaagatgcaattaacgatgaaaatatagaacga
ttagccactggcgatattgtgatgtcggcacccatggtcggtaaaagcgaaaaaggccta
actgaacaagaaaaaatatggcttgaacctttccaaacatggtgtgatggtttaggtgag
ctaggccttaaaaatgagcgtagaatgctgcgcttaatcccacaaaacctagcggtagaa
acattagacgaaaccacgttaaaactaagctttggcttaccaaaagggtgttttgcaacc
gcattattacgtgagctggtggattatagagatgcaagcccgcgagagcgcaaagaaaag
gataatgacataaatgaagatactgttaagtaa
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